| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3468 |
|---|
| Symbol | nlpI |
|---|
| ID | 6792575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3365464 |
|---|
| End bp | 3366348 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642777604 |
|---|
| Product | lipoprotein NlpI |
|---|
| Protein accession | YP_002148208 |
|---|
| Protein GI | 197249279 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTT TTTTGCGCTG GTGTTTCGTT GCGACAGCAC TTACGCTTGC AGGATGCAGT
AATTCCGCCT GGCGTAAAAG TGAAGTCCTC GCAGTACCAT TGCAACCGAC TTTACAGCAG
GAAGTGATTC TGGCGCGTAT GGAACAGATT CTTGCCAGTC GGGCTTTAAC CGATGACGAA
CGCGCACAGC TTTTATATGA GCGCGGAGTG TTGTATGATA GTCTTGGTTT GAGGGCATTA
GCGCGAAATG ATTTTTCACA AGCGCTGGCA ATCAGACCGG ATATGCCTGA AGTATTCAAT
TACTTAGGCA TTTATTTAAC GCAGGCAGGC AATTTTGATG CTGCCTATGA AGCGTTTGAT
TCTGTACTAG AGCTTGATCC AACTTACAAC TACGCGCACT TAAACCGCGG TATCGCATTG
TATTACGGCG GCCGTGATAA GTTAGCGCAA GATGATCTGC TGGCGTTTTA TCAAGACGAT
CCCAATGATC CTTACCGCAG CCTGTGGCTG TATCTTGTTG AGCAGAAGCT TAATGAGAAG
CAGGCGAAAG AAGCGTTAAA AGCACGCTTT GAAAAATCGG ATAAAGAGCA ATGGGGATGG
AACATTGTCG AGTTCTACCT GGGCGACATT AGCGAAGCAA CGCTGATGGA AAGGCTCAAG
GCGGACGCAA CGGATAACAC CTCGCTCGCT GAGCATCTCA GTGAAACCAA CTTCTATTTA
GGTAAGTATT ACCTAAGTCT GGGGGATTTG GACAGCGCCA CGGCTCTGTT CAAACTGGCG
GTGGCCAACA ACGTTCATAA CTTTGTTGAG CACCGATACG CATTGTTGGA ATTATCGCTC
CTGGGCCAGG ACCAAGATGA CCTGGCAGAA TCGGACCAGC AATAG
|
|---|
| Protein sequence | MKPFLRWCFV ATALTLAGCS NSAWRKSEVL AVPLQPTLQQ EVILARMEQI LASRALTDDE
RAQLLYERGV LYDSLGLRAL ARNDFSQALA IRPDMPEVFN YLGIYLTQAG NFDAAYEAFD
SVLELDPTYN YAHLNRGIAL YYGGRDKLAQ DDLLAFYQDD PNDPYRSLWL YLVEQKLNEK
QAKEALKARF EKSDKEQWGW NIVEFYLGDI SEATLMERLK ADATDNTSLA EHLSETNFYL
GKYYLSLGDL DSATALFKLA VANNVHNFVE HRYALLELSL LGQDQDDLAE SDQQ
|
|---|
| |