Gene SeAg_B3467 details

Gene Information

• Locus tag: SeAg_B3467
• Symbol: deaD
• ID: 6794566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 3363396
• End bp: 3365285
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 642777603
• Product: ATP-dependent RNA helicase DeaD
• Protein accession: YP_002148207
• Protein GI: 197249912
• COG category: [J] Translation, ribosomal structure and biogenesis; [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0513] Superfamily II DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAT TCGAAACCAC TTTTGCAGAT CTGGGGCTGA AGGCTCCTAT CCTTGAAGCC 
CTTACCGATC TGGGTTACGA AAAACCATCT CCAATCCAGG CAGAGTGCAT TCCGCATCTG 
CTGGGCGGTC GCGACGTGCT GGGCATGGCC CAGACCGGTA GCGGCAAAAC CGCAGCGTTC 
TCTTTACCGC TGCTCAACAA TCTTGATCCT GAGCTGAAGG CACCTCAGAT TCTGGTGCTG 
GCGCCGACCC GCGAACTGGC GGTACAGGTT GCCGAAGCCA TGACGGATTT CTCTAAACAC 
ATGCGCGGCG TAAACGTGGT TGCCCTGTAC GGCGGTCAGC GTTATGACGT GCAGTTACGC 
GCCCTGCGTC AGGGGCCGCA GATCGTTGTC GGTACGCCGG GACGTCTGCT TGATCACTTA 
AAACGCGGCA CCCTCGACCT CTCTAAACTG AGTGGTCTGG TGCTGGATGA AGCCGACGAA 
ATGCTGCGTA TGGGCTTCAT CGAAGACGTT GAAACTATTA TGGCGCAGAT CCCGGAAGGT 
CATCAGACCG CTCTGTTCTC CGCCACCATG CCGGAAGCGA TTCGTCGCAT TACCCGCCGC 
TTTATGAAAG AGCCGCAGGA AGTGCGCATT CAGTCCAGCG TGACTACCCG TCCTGACATC 
AGCCAGAGCT ACTGGACTGT CTGGGGTATG CGTAAAAACG AAGCGCTGGT GCGTTTCCTG 
GAAGCGGAAG ACTTTGATGC GGCGATTATC TTCGTACGTA CCAAAAACGC GACCCTGGAA 
GTAGCAGAAG CTCTGGAACG TAGCGGCTAC AACAGCGCCG CGTTGAATGG CGATATGAAC 
CAGGCGCTGC GTGAGCAGAC TCTGGAGCGC CTGAAAGATG GTCGTCTGGA CATCCTGATC 
GCTACCGACG TTGCGGCACG TGGTCTGGAC GTTGAACGTA TCAGCCTGGT GGTGAACTAC 
GATATCCCGA TGGATTCCGA GTCCTACGTT CACCGTATCG GTCGTACCGG CCGTGCGGGT 
CGCGCCGGTC GCGCGCTGCT GTTCGTTGAG AACCGCGAGC GTCGTCTGCT GCGCAACATC 
GAACGCACCA TGAAGCTGAC CATTCCGGAA GTGGAACTGC CGAACGCAGA ACTGCTGGGT 
AAACGCCGTC TGGAAAAATT CGCCGCGAAA GTTCAGCAGC AACTGGAAAG CAGCGATCTG 
GATCAGTACC GTGCGCTGCT GGCGAAAATC CAGCCGTCTG CTGAAGGTGA AGAGCTGGAT 
CTCGAAACGC TGGCTGCCGC ACTGCTGAAA ATGGCGCAGG GCGAGCGTCC GCTGATTCTG 
CCGCCGGATG CGCCGATGCG TCCTAAGCGT GAATTCCGTG ACCGTGATGA CCGTGGTCCG 
CGCGATCGTA ATGACCGTGG CCCGCGTGGC GACCGGGAAG AACGTCCGCG TCGTGAACGT 
CGTGACGTTG GCGATATGCA GTTATACCGC ATTGAAGTGG GCCGTGATGA CGGCGTTGAA 
GTTCGTCATA TCGTGGGCGC TATCGCTAAC GAAGGCGACA TCAGCAGCCG TTACATTGGT 
AACATTAAGC TGTTCGCGTC TCACTCCACC ATCGAGCTGC CGAAAGGTAT GCCGGGCGAA 
GTGCTCCAGC ACTTCACGCG TACCCGCATT CTGAACAAGC CGATGAATAT GCAGCTGTTG 
GGTGATGCGG TTCCGCACGC GGGCGGCGAA CGTCGCGGCG GTGGTCGTAG CTTCAGTGGC 
GAACGTCGTG AAGGCGGTCG TAATTTCAGC GGCGAACGTC GTGAAGGTGG TCGTGGTGAT 
GGTCGTCGCT TCAGCGGCGA GCGTCGTGAA AGCCGTGGTC CGCGTCGTGA TGACTCTACC 
GGTCGCCGTC GTTTCGGCGG TGATGCGTAA 

 

Protein sequence

MAEFETTFAD LGLKAPILEA LTDLGYEKPS PIQAECIPHL LGGRDVLGMA QTGSGKTAAF 
SLPLLNNLDP ELKAPQILVL APTRELAVQV AEAMTDFSKH MRGVNVVALY GGQRYDVQLR 
ALRQGPQIVV GTPGRLLDHL KRGTLDLSKL SGLVLDEADE MLRMGFIEDV ETIMAQIPEG 
HQTALFSATM PEAIRRITRR FMKEPQEVRI QSSVTTRPDI SQSYWTVWGM RKNEALVRFL 
EAEDFDAAII FVRTKNATLE VAEALERSGY NSAALNGDMN QALREQTLER LKDGRLDILI 
ATDVAARGLD VERISLVVNY DIPMDSESYV HRIGRTGRAG RAGRALLFVE NRERRLLRNI 
ERTMKLTIPE VELPNAELLG KRRLEKFAAK VQQQLESSDL DQYRALLAKI QPSAEGEELD 
LETLAAALLK MAQGERPLIL PPDAPMRPKR EFRDRDDRGP RDRNDRGPRG DREERPRRER 
RDVGDMQLYR IEVGRDDGVE VRHIVGAIAN EGDISSRYIG NIKLFASHST IELPKGMPGE 
VLQHFTRTRI LNKPMNMQLL GDAVPHAGGE RRGGGRSFSG ERREGGRNFS GERREGGRGD 
GRRFSGERRE SRGPRRDDST GRRRFGGDA