| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3462 |
|---|
| Symbol | |
|---|
| ID | 6794232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 3358488 |
|---|
| End bp | 3359366 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642777598 |
|---|
| Product | peptidase, U32 family |
|---|
| Protein accession | YP_002148202 |
|---|
| Protein GI | 197247721 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT CCTTAGGACC GGTGCTTTAT TACTGGCCGA AAGAGACGCT GGAAGATTTT
TATCAGCAGG CCGCAAAAAG CAGCGCTGAC GTCATTTATC TGGGCGAAGC GGTGTGCAGC
AAGCGTCGCG CGACTAAAGT CGGCGACTGG CTGGAAATGG CGAAATCCCT CGCTGCCAGC
GGTAAGCAGG TGGCGCTCTC CACCCTGGCG CTGGTACAGG CGTCATCTGA ATTAAGCGAG
CTGAAACGCT ATGTGGACAA CGGCGATTTT CTGCTGGAAG CCAGCGATCT TGGCGTGGTG
AATCTGTGCG CCGAGCGCAA ACTGCCGTTT GTCGCCGGCC ATGCGCTGAA CTGCTACAAC
GCGGTCACGC TGCGCCGGTT GCTGAAAGAA GGCATGGTAC GCTGGTGTAT GCCAGTGGAG
CTGTCTCGCG ACTGGCTGGT GAATTTGCTT AATCAGTGCG ATGAACTGGG CATCCGCAAT
CAGTTTGAAG TGGAAGTGTT GAGCTACGGC CATCTGCCGC TGGCCTACTC CGCTCGCTGC
TTTACCGCCC GTTCGGAAGA CCGTCCGAAA GATGAGTGCG AAACCTGCTG TATCAAGTAT
CCAAACGGTC GTGACGTGCT CTCGCAAGAG AATCAGCAGG TGTTTGTGCT TAACGGTATT
CAGACCATGA GCGGCTATGT CTATAACCTT GGCAACGAAC TGACGTCAAT GCAGGGATTG
GTCGATATCG TGCGCCTGTC GCCGTTGGGG ACGGAGACAT TTGCCATGCT TGATGCCTTT
CGCGCTAACG AAAACGGCGG CGCACCATTA CCGCTTGCCG CGCATAGCGA CTGTAACGGC
TACTGGAAGC GGCTGGCCGG GCTGGAGCTA CAGGCCTAG
|
|---|
| Protein sequence | MKYSLGPVLY YWPKETLEDF YQQAAKSSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAAS
GKQVALSTLA LVQASSELSE LKRYVDNGDF LLEASDLGVV NLCAERKLPF VAGHALNCYN
AVTLRRLLKE GMVRWCMPVE LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC
FTARSEDRPK DECETCCIKY PNGRDVLSQE NQQVFVLNGI QTMSGYVYNL GNELTSMQGL
VDIVRLSPLG TETFAMLDAF RANENGGAPL PLAAHSDCNG YWKRLAGLEL QA
|
|---|
| |