Gene SeAg_B3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3390 
Symbolcca 
ID6794295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp3292146 
End bp3293387 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content59% 
IMG OID642777529 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_002148134 
Protein GI197249983 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0332475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATTT ATCTGGTCGG TGGTGCGGTT CGGGATGCGT TGTTAGGGCT ACCGGTTAAA 
GATAAAGATT GGGTCGTTGT CGGCGCCACG CCGCAGGAGA TGCTTGATGC GGGCTACCAG
CAGGTAGGCC GTGATTTTCC TGTGTTTCTC CATCCGCAAA CTCACGAAGA ATACGCGCTG
GCGCGTACCG AGCGTAAGTC CGGTTCCGGC TACACGGGTT TCACCTGCTA TGCCGCGCCG
GACGTTACCC TGGAAGCCGA CCTCCAGCGT CGCGATCTGA CCATTAACGC TCTGGCGCGC
GACGATGACG GCCAGATTAT CGACCCTTAC CACGGGCGCC GGGATCTGGA GGCGCGTCTA
CTGCGCCATG TCTCTCCCGC GTTTGGCGAA GATCCCTTGC GCGTATTGCG CGTGGCGCGT
TTTGCCGCCC GTTACGCTCA TCTTAGTTTC CGTATCGCCG ATGAAACACT GGCGCTAATG
CGCGAAATGA CCGCGGCAGG CGAGCTGGAA CATCTGACGC CGGAACGGGT ATGGAAAGAG
ACGGAAAATG CGCTTACCAC CCGCAATCCG CAGGTTTACT TCCAGGTATT GCGCGACTGC
GGCGCCCTGC GCGTCCTGTT TCCGGAAATC GACGCCCTGT TTGGCGTACC CGCGCCGGCA
AAGTGGCATC CGGAAATTGA TACCGGAGTT CATACGTTGA TGACGCTGTC GATGGCCGCC
ATGCTCAGTC CGCAGCTTGA TGTCCGTTTC GCCACGCTTT GTCATGATCT GGGCAAAGGC
TTAACGCCGA AAAACCTCTG GCCGCGCCAT CATGGCCACG GCCCGGCGGG CGTGAAACTG
GTCGAACAGT TATGCCAGCG TTTGCGCGTC CCCAATGACC TGCGTGATTT AGCTAAACTG
GTCGCCGAAT ACCACGATCT GATCCACACC TTTCCGATAC TCCAGCCGAA AACGATCGTT
AAGCTGTTTG ACGCCATTGA TGCATGGCGT AAACCGCAGC GCGTCGAGCA GATTGCGCTG
ACCAGCGAGG CCGATGTCCG TGGACGTACC GGATTTGAAG CGTCGGATTA CCCGCAGGGG
CGCTGGCTGC GCGAAGCCTG GCAGGTGGCC CAAGCGGTAC CGACGAAAGA GGTGGTGGAG
GCCGGATTTA AGGGCATTGA GATTCGCGAG GAGCTGACCA AGCGACGAAT TGCAGCGGTC
GCCAACTGGA AAGAGAAGCG CTGCCCGAAC CCCGCCAGCT AA
 
Protein sequence
MKIYLVGGAV RDALLGLPVK DKDWVVVGAT PQEMLDAGYQ QVGRDFPVFL HPQTHEEYAL 
ARTERKSGSG YTGFTCYAAP DVTLEADLQR RDLTINALAR DDDGQIIDPY HGRRDLEARL
LRHVSPAFGE DPLRVLRVAR FAARYAHLSF RIADETLALM REMTAAGELE HLTPERVWKE
TENALTTRNP QVYFQVLRDC GALRVLFPEI DALFGVPAPA KWHPEIDTGV HTLMTLSMAA
MLSPQLDVRF ATLCHDLGKG LTPKNLWPRH HGHGPAGVKL VEQLCQRLRV PNDLRDLAKL
VAEYHDLIHT FPILQPKTIV KLFDAIDAWR KPQRVEQIAL TSEADVRGRT GFEASDYPQG
RWLREAWQVA QAVPTKEVVE AGFKGIEIRE ELTKRRIAAV ANWKEKRCPN PAS