Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3367 |
Symbol | tolC |
ID | 6793025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 3270185 |
End bp | 3271654 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642777508 |
Product | outer membrane channel protein |
Protein accession | YP_002148113 |
Protein GI | 197250447 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TGCTCCCCAT CCTTATCGGC CTGAGCCTGT CGGGGTTCAG CACACTAAGC CAGGCAGAGA ACCTGATGCA AGTTTATCAG CAAGCACGCC TGAGCAACCC GGAATTGCGT AAATCCGCTG CCGATCGCGA TGCTGCATTC GAAAAAATTA ACGAAGCGCG TAGTCCTTTA CTGCCGCAAC TGGGTTTAGG TGCCGACTAC ACCTACAGCA ACGGTTATCG CGATGCGAAC GGTATCAACT CCAATGAAAC CAGCGCTTCC CTGCAATTAA CGCAGACGCT ATTTGATATG TCGAAATGGC GTGGGCTCAC CCTGCAAGAA AAAGCAGCAG GCATTCAGGA TGTCACCTAT CAGACCGATC AGCAGACGCT GATCCTCAAT ACCGCGAACG CGTATTTTAA GGTATTGAAC GCTATTGATG TGCTTTCCTA TACCCAGGCG CAAAAAGAGG CTATCTACCG TCAGTTAGAT CAAACGACGC AACGTTTTAA CGTGGGTCTG GTCGCCATTA CCGACGTGCA AAACGCCCGT GCGCAATATG ATACCGTACT GGCGAATGAA GTGACCGCCC GCAACAACCT GGATAACGCG GTAGAAGAGC TGCGCCAGGT GACCGGCAAT TATTACCCGG AGCTGGCGTC GCTTAACGTC GAGCATTTTA AAACCGACAA ACCCAAAGCT GTTAATGCGC TGCTGAAGGA AGCGGAAAAC CGTAACCTGT CGCTGTTGCA GGCGCGTTTA AGTCAGGATC TGGCGCGCGA GCAAATCCGT CAGGCGCAGG ATGGTCACCT GCCAACGCTG AATTTAACGG CCTCAACCGG CATTTCTGAT ACCTCTTATA GCGGTTCTAA AACCAACTCC GCCCAGTACG ACGATAGCAA CATGGGGCAG AATAAAATCG GCCTGAACTT CTCCCTGCCG CTGTATCAAG GCGGGATGGT TAACTCGCAG GTAAAACAGG CGCAGTATAA CTTCGTCGGC GCAAGCGAAC AGCTGGAAAG CGCGCACCGT AGCGTGGTGC AGACCGTACG TTCTTCCTTT AACAATATTA ACGCCTCCAT CAGTAGCATC AACGCGTATA AACAGGCGGT CGTTTCCGCG CAAAGTTCTT TGGATGCAAT GGAAGCCGGT TACTCGGTCG GTACACGTAC CATTGTTGAC GTACTGGATG CCACCACCAC TCTGTATGAT GCCAAGCAGC AACTGGCCAA CGCGCGTTAT ACCTATTTGA TTAATCAGTT AAATATCAAA TATGCGCTCG GTACGCTGAA CGAGCAGGAT CTGCTCGCGC TTAACAGTAC GTTGGGTAAA CCTATCCCGA CGTCGCCGGA AAGCGTAGCG CCGGAAACGC CAGAGCAGGA TGCTGCCGCA GACGGTTATA ATGCCCATAG CGCCGCGCCG GCAGTACAGC CGACCGCCGC TCGCGCCAAC AGCAATAACG GCAATCCATT CCGGCATTGA
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Protein sequence | MKKLLPILIG LSLSGFSTLS QAENLMQVYQ QARLSNPELR KSAADRDAAF EKINEARSPL LPQLGLGADY TYSNGYRDAN GINSNETSAS LQLTQTLFDM SKWRGLTLQE KAAGIQDVTY QTDQQTLILN TANAYFKVLN AIDVLSYTQA QKEAIYRQLD QTTQRFNVGL VAITDVQNAR AQYDTVLANE VTARNNLDNA VEELRQVTGN YYPELASLNV EHFKTDKPKA VNALLKEAEN RNLSLLQARL SQDLAREQIR QAQDGHLPTL NLTASTGISD TSYSGSKTNS AQYDDSNMGQ NKIGLNFSLP LYQGGMVNSQ VKQAQYNFVG ASEQLESAHR SVVQTVRSSF NNINASISSI NAYKQAVVSA QSSLDAMEAG YSVGTRTIVD VLDATTTLYD AKQQLANARY TYLINQLNIK YALGTLNEQD LLALNSTLGK PIPTSPESVA PETPEQDAAA DGYNAHSAAP AVQPTAARAN SNNGNPFRH
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