| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3320 |
|---|
| Symbol | hybC |
|---|
| ID | 6794587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3225070 |
|---|
| End bp | 3226773 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642777463 |
|---|
| Product | hydrogenase 2 large subunit |
|---|
| Protein accession | YP_002148068 |
|---|
| Protein GI | 197248446 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.118706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA GAATTACTAT TGATCCGGTA ACCCGTATTG AGGGTCATTT ACGCATTGAC
TGCGAAATTG AGAACGGCGT CGTATCCAAA GCATGGGCGT CCGGCACCAT GTGGCGCGGT
ATGGAAGAGA TCGTGAAGAA CCGCGATCCG CGCGATGCGT GGATGATTGT GCAGCGTATT
TGCGGCGTTT GTACGACAAC TCACGCGATC TCCTCCGTTC GTGCGGCAGA AAGCGCGCTG
AATATTGATG TTCCCGTCAA CGCGCAGTAT ATCCGTAATA TTATTCTGGC GGCGCATACC
ACCCATGACC ACATTGTCCA TTTCTACCAG CTCTCTGCGC TGGACTGGGT GGACATTACC
TCTGCGCTGA AAGCCGATCC GGAAAAAGCT TCTGCGATGC TGGATGGCGT GTCGAGCTGG
CACCTGAACA GCGCGCAAGA GTTCACGAAA GTTCAGAACA AGATCAAGGA TCTTGTCGCC
AGCGGTCAGT TAGGTATTTT CGCCAATGGC TACTGGGGGC ACCCGGCAAT GCAGTTACCG
CCGGAGGTCA ACCTGATTGC GGTCGCCCAC TATTTGCAGG CGCTGGAATG TCAGCGTGAC
GCTAACCGCG TGGTGGCGTT GCTGGGCGGT AAATCGCCGC ATATCCAGAA CCTGGCGGTC
GGTGGGGTGG CGAACCCGAT CAATCTCGAC AGTATCGGTA CGTTGAACCT TGAACGCCTG
ATGTACATCA AATCGTTTAT CGATAAGCTG AGCGATTTTG TCGAGCAGGT GTATAAAGTG
GATACCGCAG TCATCGCGGC CTACTATCCG GAATGGCTGG AGCGTGGCAA AGGCGCGGTG
AACTACCTGA GCGCGCCGGA ATTCCCGACC GACGGTAAAA ACGGCAGTTT CCTGTTCCCG
GGCGGTTACA TTACCAATGC CGATCTGTCG ACATACCGTC CGATCACCTC TCACTCCGAC
GAATTCCTGA TTAAAGGTAT TCAGGAGAGC GCGAAGCACG CCTGGTACAA AGATGAAGCG
CCGCAGGCGC CGTGGGAAGG CACTACGATC CCGGCTTACG ACGGTTGGTC GGATGACGGT
AAATACTCAT GGGTCAAGTC GCCGACATTC TACGGCAAAA CCGTCGAAGT CGGGCCGCTG
GCGAACATGC TGTGTAAACT GGCTGCAGGT CGTGAATCCA CCCAGGCCAA GCTCAATGAA
ATCATTGCGC TTTATCAGAA GCTGACCGGC AAAACGCTGG AAATGGCGCA ACTTCACTCT
ACGCTGGGTC GTATCATCGG GCGTACTGTT CACTGTTGTG AACTGCAAAA CATATTGCAG
GATCAATACA ACGCGCTGAT TGTAAATATC GGCAAAGGCG ATTACACCAC GTTTGTGAAG
CCGAACATTC CGGCGACGGG CGAGTTCAAA GGCGTGGGCT TCCTGGAGGC GCCGCGCGGT
ATGCTGTCTC ACTGGATGGT GATTAAAGAC GGTATTATCA GTAACTATCA GGCAGTGGTG
CCATCGACCT GGAACTCAGG TCCGCGTAAC TTCAACGATG ACGTGGGGCC GTACGAACAG
TCGTTGGTCG GTACGCCGAT CGCCGATCCG GCGAAGCCGC TGGAAGTGGT ACGTACCATC
CACTCCTTCG ACCCTTGCAT GGCGTGCGCG GTGCACGTGG TGGACGCCGA TGGCAATGAA
GTGGTCTCGG TGAAGGTTTT GTAA
|
|---|
| Protein sequence | MSQRITIDPV TRIEGHLRID CEIENGVVSK AWASGTMWRG MEEIVKNRDP RDAWMIVQRI
CGVCTTTHAI SSVRAAESAL NIDVPVNAQY IRNIILAAHT THDHIVHFYQ LSALDWVDIT
SALKADPEKA SAMLDGVSSW HLNSAQEFTK VQNKIKDLVA SGQLGIFANG YWGHPAMQLP
PEVNLIAVAH YLQALECQRD ANRVVALLGG KSPHIQNLAV GGVANPINLD SIGTLNLERL
MYIKSFIDKL SDFVEQVYKV DTAVIAAYYP EWLERGKGAV NYLSAPEFPT DGKNGSFLFP
GGYITNADLS TYRPITSHSD EFLIKGIQES AKHAWYKDEA PQAPWEGTTI PAYDGWSDDG
KYSWVKSPTF YGKTVEVGPL ANMLCKLAAG RESTQAKLNE IIALYQKLTG KTLEMAQLHS
TLGRIIGRTV HCCELQNILQ DQYNALIVNI GKGDYTTFVK PNIPATGEFK GVGFLEAPRG
MLSHWMVIKD GIISNYQAVV PSTWNSGPRN FNDDVGPYEQ SLVGTPIADP AKPLEVVRTI
HSFDPCMACA VHVVDADGNE VVSVKVL
|
|---|
| |