Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3304 |
Symbol | |
ID | 6793152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 3208466 |
End bp | 3209389 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642777447 |
Product | polysaccharide deacetylase domain protein |
Protein accession | YP_002148052 |
Protein GI | 197251441 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.216596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATATT TAAAATTACC TGAGGGTAAA AGGATTGCGG TCAATCTTGG TGTCGATGTA GATGCTCAGT CTTTATGGCT GGGCGGATTT AATCGACCGT CGCCATCCTT TATGTCACGA GGAGAGTTTG GTGCACAAGT TGGCGTACCA AGGCTTCTGA AATTGTTTAA AGAAAATAAT ATCAAAACCA CCTTTTTTAT TCCCGGACAC ACTGTAGACA CCTTCCCGGA AATCAGTAAA GCGATTTTTG ATGCCGGGCA TGAAATCGCT CACCATGGCT ACTATCATGA AAATCCGACT CTGGTGAATC GTGATACAGA ACGCCGACTT ATGGATCTGG CGTTCGCCTG TTATAAAAGA CATTTTGGCA TACGCCCTGT GGGATACCGT TCTCCCTATT GGGATTATAG CGAGAATACG CTGGATCTTC TGGAGGAAGC CGGTTTTCTC TATGACAGTA GCCTGATGGC GAGAGATCTT GTGCCTTACC ATCCTCAACG TTGGCAGGTG AATTGGGAAA CGGGAAATAT CGCAGGCCCG GCCAGCGCGA TTCTGGAAAT TCCTGTTAGC TGGTATCTGG ATGATTTTCC CGCACTGGCG TATACCGGCA ACCAGGAGGG GATGAGCGAT ACTGACGGTG TTCTGCGACG CTGGAAGGAT ATTTTTACCT ATGCTTATCA CCATCAGGAA AACGGTTTAT ATGCGATGGC CCTTCATCCG CAGATAATCG GTCATGGGCA TCATATGATG ATGTTGTCAC GTTTGATTGA ACATATTAAA GGGCATGATG GCGTATGGTT TGCAACCTGT GAAGAGATAG CCAGTGTCTG GGTGGATGAC GAAGAGGATC GACAAAAAAT GCTCCGTCCT GATGTTCGTG GCGTAGCGCC GGTTCCGGAT GATTATGGCT GGCCGGGCAA ATGA
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Protein sequence | MGYLKLPEGK RIAVNLGVDV DAQSLWLGGF NRPSPSFMSR GEFGAQVGVP RLLKLFKENN IKTTFFIPGH TVDTFPEISK AIFDAGHEIA HHGYYHENPT LVNRDTERRL MDLAFACYKR HFGIRPVGYR SPYWDYSENT LDLLEEAGFL YDSSLMARDL VPYHPQRWQV NWETGNIAGP ASAILEIPVS WYLDDFPALA YTGNQEGMSD TDGVLRRWKD IFTYAYHHQE NGLYAMALHP QIIGHGHHMM MLSRLIEHIK GHDGVWFATC EEIASVWVDD EEDRQKMLRP DVRGVAPVPD DYGWPGK
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