Gene SeAg_B3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3261 
Symbol 
ID6796151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp3175996 
End bp3176682 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content56% 
IMG OID642777406 
Productregulatory protein, IclR 
Protein accessionYP_002148012 
Protein GI197251573 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.798479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAC AACCGAATCA AAGCCTGATA GATGGCATTC GCTGTCTGCA ATATCTGGTT 
TCCAGCGACC GTGCTATCGG ATGTCGCGAG CTTGCCCGGC TGATGGATAT TAATACCACG 
CGCGTTAATC GCCTGTTAAT GACGATGGCC TCTATTGGAC TCACGATGCA GGATGAGCAC 
CGACGCTATT TACCCGGGCC AGGCATTCAT GCTTTGGCGG CGCAGGCGAT TCGTGGTTCA 
GCGCTGTTCT CCTATGCGTT GCCTATCCTT GAACGCCATG CGCCCAAAGA CATCGTGGTG 
GCATTAGGCG TGCTATGGGA AGACCAGATT ATCTATATTT ATCACTCTAC GCCGGGTTCG 
CAGGGAAGTC AGGCGCTGGC GGGGTTTCGC ATGTGCCCGG CCTGGCAGTC GGTAACAGGA 
GTGGCGTTAC TGGCGGCAGA AAGCGATGAG GCGCTAATGC AGCGTTTTAC TCCGGAGCAG 
TGGCGTAATC TGGCGCCGCA TGTGGCGCAG CAGCGCCAGC GGGGATACGT GCTGTGGCAT 
CACGCTGATG GTGAAGTTTC TATGGCGCAA CCGCTAGACA AGCACGCCGC AGCGCTGGCC 
TTTGCGGGAA TGTGGCGGAT TGATGAGGCG GAGGCGGCTG CGCGTTTACA GGCGTTGAAG 
GCATTAAACC AGCTTATTGC CCAGTAA
 
Protein sequence
MSSQPNQSLI DGIRCLQYLV SSDRAIGCRE LARLMDINTT RVNRLLMTMA SIGLTMQDEH 
RRYLPGPGIH ALAAQAIRGS ALFSYALPIL ERHAPKDIVV ALGVLWEDQI IYIYHSTPGS 
QGSQALAGFR MCPAWQSVTG VALLAAESDE ALMQRFTPEQ WRNLAPHVAQ QRQRGYVLWH 
HADGEVSMAQ PLDKHAAALA FAGMWRIDEA EAAARLQALK ALNQLIAQ