Gene SeAg_B3238 details

Gene Information

• Locus tag: SeAg_B3238
• Symbol: tktA
• ID: 6792608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 3153286
• End bp: 3155277
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642777384
• Product: transketolase
• Protein accession: YP_002147990
• Protein GI: 197251895
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTCAC GTAAAGAGCT TGCCAATGCT ATTCGTGCGC TGAGCATGGA CGCAGTACAG 
AAAGCCAAAT CCGGTCACCC GGGTGCCCCG ATGGGTATGG CTGACATTGC CGAAGTCCTG 
TGGCGTGATT TCCTGAACCA CAACCCGACC AACCCGTCCT GGGCCGACCG CGACCGCTTT 
GTGCTGTCCA ATGGCCATGG TTCGATGCTG ATTTACAGCC TGCTGCACCT CACCGGCTAT 
GACCTGCCGA TGTCCGAACT GCAGAATTTC CGTCAGCTAC ATTCAAAAAC CCCGGGTCAC 
CCGGAAGTGG GCTACACCGC TGGTGTTGAA ACCACTACTG GCCCGCTGGG TCAGGGTATT 
GCCAACGCCG TCGGGATGGC GATTGCCGAG AAAACTCTGG CGGCGCAGTT TAACCGTCCT 
GGCCACGACA TCGTTGACCA CTTCACCTAC GTCTTTATGG GCGACGGCTG CATGATGGAA 
GGCATTTCTC ACGAAGTGTG CTCTCTGGCT GGTACTCTGA AACTGGGCAA ACTGATCGCG 
TTCTATGATG ACAACGGTAT CTCTATCGAT GGTCATGTTG AAGGCTGGTT CACCGATGAC 
ACCGCGAAAC GTTTTGAAGC CTACGGCTGG CATGTTATCC GTGGCATTGA CGGTCACGAT 
GCCGACGCCA TTAAACGCGC CACGGAAGAA GCTCGCGCCG TGACTGACAA ACCGTCTCTG 
CTGATGTGCA AAACCATCAT CGGTTTCGGT TCGCCGAACA AACAGGGTAC CCACGATTCC 
CACGGCGCGC CGCTGGGCGA CGCGGAAATC GCGCTGACCC GCGAACAGTT GGGCTGGAAA 
TACGCGCCGT TCGAAATCCC GTCTGAAATC TACGCCCAGT GGGATGCGAA AGAAGCCGGC 
CAGGCGAAAG AGTCTGCATG GAATGAGAAA TTCGCGGCTT ATGAGAAAGC CTTCCCGCAG 
GAAGCTGCTG AATTCTCTCG TCGTATGAAA GGCGACATGC CGGCTGACTT CGATGCGAAA 
GCGAATGAGT TCATCGCTAA ACTGCAGGCG AATCCATCCA AAATCGCCAG CCGTAAAGCG 
TCCCAGAATG CCATCGAAGC CTTCGGTCCG CTGTTGCCGG AATTCCTTGG CGGCTCTGCA 
GACCTGGCAC CGTCTAACCT GACCCTATGG TCCGGTTCTA AGGCTATCAA CGAAGACGCC 
GCAGGTAACT ACATTCATTA CGGTGTGCGC GAATTCGGTA TGACCGCTAT CGCCAACGGT 
ATCGCCCTGC ACGGCGGTTT CCTGCCGTAC ACCTCCACCT TCCTGATGTT CGTCGAATAT 
GCCCGTAACG CAGTGCGTAT GGCAGCGTTG ATGAAACAAC GTCAGGTGAT GGTTTACACC 
CACGACTCCA TCGGTCTGGG CGAAGATGGC CCGACGCACC AGCCGGTCGA GCAGGTGGCA 
AGCCTGCGCG TAACGCCGAA CATGTCCACA TGGCGTCCGT GCGACCAGGT GGAATCCGCG 
GTGGCGTGGA AATATGGCGT AGAGCGTCAG GATGGCCCAA CCGCGCTGAT TCTATCCCGT 
CAGAACCTGG CGCAGCAGGA ACGTACTGAA GAGCAACTGG CGAATATCGC CCGCGGTGGT 
TACGTACTGA AAGATTGTGC GGGCCAGCCG CAGATTATCT TCATTGCGAC CGGTTCTGAG 
GTTGAGCTGG CGGTTGCCGC TTACGAAAAA CTGACTGCCG AAGGCGTGAA GGCGCGCGTG 
GTTTCCATGC CGTCCACCGA CGCATTCGAC AAGCAGGATG CGGCCTACCG TGAATCCGTG 
CTGCCGAAAG CGGTCTCTGC GCGTGTGGCG ATTGAAGCGG GTATCGCTGA CTACTGGTTC 
AAATACGTCG GCCTGAACGG CGCTATTGTC GGGATGACCA CCTTCGGTGA ATCCGCCCCG 
GCAGAGCTGC TGTTTGAAGA GTTTGGCTTC ACGGTGGACA ACGTGATCGC CAAAGCGAAA 
GCGCTGCTGT AA 

 

Protein sequence

MSSRKELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WRDFLNHNPT NPSWADRDRF 
VLSNGHGSML IYSLLHLTGY DLPMSELQNF RQLHSKTPGH PEVGYTAGVE TTTGPLGQGI 
ANAVGMAIAE KTLAAQFNRP GHDIVDHFTY VFMGDGCMME GISHEVCSLA GTLKLGKLIA 
FYDDNGISID GHVEGWFTDD TAKRFEAYGW HVIRGIDGHD ADAIKRATEE ARAVTDKPSL 
LMCKTIIGFG SPNKQGTHDS HGAPLGDAEI ALTREQLGWK YAPFEIPSEI YAQWDAKEAG 
QAKESAWNEK FAAYEKAFPQ EAAEFSRRMK GDMPADFDAK ANEFIAKLQA NPSKIASRKA 
SQNAIEAFGP LLPEFLGGSA DLAPSNLTLW SGSKAINEDA AGNYIHYGVR EFGMTAIANG 
IALHGGFLPY TSTFLMFVEY ARNAVRMAAL MKQRQVMVYT HDSIGLGEDG PTHQPVEQVA 
SLRVTPNMST WRPCDQVESA VAWKYGVERQ DGPTALILSR QNLAQQERTE EQLANIARGG 
YVLKDCAGQP QIIFIATGSE VELAVAAYEK LTAEGVKARV VSMPSTDAFD KQDAAYRESV 
LPKAVSARVA IEAGIADYWF KYVGLNGAIV GMTTFGESAP AELLFEEFGF TVDNVIAKAK 
ALL