Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3127 |
Symbol | gcvA |
ID | 6793813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 3051701 |
End bp | 3052618 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642777285 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_002147894 |
Protein GI | 197251092 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000208594 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAC GATTACCTCC TTTAAATGCG TTACGCGTTT TTGATGCTGC CGCGCGCCAT TTGAGCTTTA CGCGAGCAGC GGAAGAACTT TTTGTGACGC AGGCCGCAGT AAGCCACCAA ATTAAGTCAC TTGAGGATTT TTTGGGGCTA AAACTGTTCC GCCGCCGCAA TCGTTCGCTG TTGCTGACGG AAGAAGGCCA AAGCTATTTT CTCGACATTA AAGAGATATT TTCCCAGCTC ACGGAAGCAA CGCGTAAGCT CCAGGCGCGC AGTGCCAAAG GGGCGCTGAC GGTGAGTTTA CCGCCCAGTT TTGCCATCCA ATGGCTGGTG CCCAGGCTCT CCAGCTTTAA CTCAGCTTAT CCGGGAATTG ACGTTCGGAT ACAAGCCGTT GACCGTCAGG AAGATAAACT GGCAGACGAT GTCGATGTCG CGATTTTTTA TGGCCGGGGA AACTGGCCGG GCTTGCGCGT CGAAAAATTA TACGCAGAAT ATTTACTGCC CGTCTGTTCT CCTTTATTAC TCACAGGCGA AAAACCGTTA AAAACGCCGG AAGATCTGGC GAAACACACG TTATTGCACG ATGCCTCCCG GCGTGACTGG CAGGCCTATA CTCGTCAGTT AGGGCTCAAC CATATTAACG TTCAGCAAGG GCCGATATTT AGCCACAGCG CGATGGTGCT ACAGGCTGCT ATTCACGGAC AGGGGATCGC GCTGGCGAAT AATGTTATGG CGCAGTCGGA AATTGAAGCC GGGCGACTGG TATGTCCATT TAACGATGTT CTGGTGAGTA AGAATGCTTT TTATCTGGTT TGTCATGACA GCCAGGCAGA ACTGGGTAAA ATAGCCGCCT TCCGTCAGTG GATTTTGGCG AAGGCGGCGA CGGAGCAAGA AAAATTCCGT TTTCGTTACG AACAATAA
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Protein sequence | MSKRLPPLNA LRVFDAAARH LSFTRAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL LLTEEGQSYF LDIKEIFSQL TEATRKLQAR SAKGALTVSL PPSFAIQWLV PRLSSFNSAY PGIDVRIQAV DRQEDKLADD VDVAIFYGRG NWPGLRVEKL YAEYLLPVCS PLLLTGEKPL KTPEDLAKHT LLHDASRRDW QAYTRQLGLN HINVQQGPIF SHSAMVLQAA IHGQGIALAN NVMAQSEIEA GRLVCPFNDV LVSKNAFYLV CHDSQAELGK IAAFRQWILA KAATEQEKFR FRYEQ
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