| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3123 |
|---|
| Symbol | |
|---|
| ID | 6794567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 3048945 |
|---|
| End bp | 3049367 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642777281 |
|---|
| Product | fuscose operon FucU protein |
|---|
| Protein accession | YP_002147890 |
|---|
| Protein GI | 197249010 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4154] Fucose dissimilation pathway protein FucU |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00768041 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA CCATTTCACC GTTAATTTCT CCGACACTGC TCAAAGTGCT GGCCGAGATG
GGCCACGGGG ACGAAATCAT TTTTTCCGAC GCTCACTTTC CCGCGCATAG CCTGGGCCCA
CAGGTGATTC GCGCCGATGG TCTTAGCGTC AGCGATCTAC TGCGGGCAAT TATTCCGCTC
TTTGAGCTGG ATAGCTACGC CCCGCCGCTG GTAATGATGG CCGCCGTGGA AGGCGACACG
CTCGACCCCA GCGTTGAAGC GCGCTATCGC GATGCTTTGT CATTAGAAGC GCCGTGCCCG
GATATCGTTC GTATCGACCG TTATGCGTTT TATGAGCGGG CGCAAAAAGC GTTTGCGATC
GTTATCACAG GTGAGTGCGC GAAGTACGGA AATATTCTTT TAAAAAAAGG GGTAACGCCG
TAA
|
|---|
| Protein sequence | MLKTISPLIS PTLLKVLAEM GHGDEIIFSD AHFPAHSLGP QVIRADGLSV SDLLRAIIPL
FELDSYAPPL VMMAAVEGDT LDPSVEARYR DALSLEAPCP DIVRIDRYAF YERAQKAFAI
VITGECAKYG NILLKKGVTP
|
|---|
| |