Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3067 |
Symbol | cse3 |
ID | 6796983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2990538 |
End bp | 2991188 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642777228 |
Product | crispr-associated protein, Cse3 family |
Protein accession | YP_002147837 |
Protein GI | 197249482 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATCTCT CAAGAATAAC GCTGCACACC AGCGAGCTTT CGCCGGCACA GCTCTTGCAT CTGGTGGAGC GCGGCGAGTA CGTGATGCAC CAGTGGTTAT GGGATCTCTT TCCCGGCGGC AAGGAACGGC AGTTTCTTTA TCGCCGCGAA GAGTTACAGG GCGCGTTTCG CTTTTTTGTT CTCTCACAGG AACAGCCTGC CGCCAGCGCG ATTTTTGACG TGCAGACTCG CCCATTTGCG CCAATGCTGA GCGCGGGACA GACGCTGCGG TTTAACTTGC GCGCCAATCC GACGGTTTGC AAAAACGGCA AGCGTCACGA TTTGCTGATG GAGGCGAAAC GCCAGCGTAA AACGCAGGGT GATAGCCAGG ATATTTGGTC TTATCAGCAG CAGGCGGCGC TGACGTGGTT GGCGCGCCAG GGGGAGCAAA ATGGCTTCAC CCTGCGCGAA ACGAGCGTTG ATGCTTATCG GCAGCAGCAG ATACGTCGAG AGAAATCCCG GCAGATGATT CAGTTTAGCA GCGTGGACTA TACCGGCGTG CTGGTGCTTA ACGATCCCGT GCTTTTCCTG CAACGTCTGG CGCAGGGGTA CGGTAAAAGC CGGGCGTTTG GCTGCGGAAT GATGATGATC AAACCCGGAG ACGACGCGTG A
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Protein sequence | MYLSRITLHT SELSPAQLLH LVERGEYVMH QWLWDLFPGG KERQFLYRRE ELQGAFRFFV LSQEQPAASA IFDVQTRPFA PMLSAGQTLR FNLRANPTVC KNGKRHDLLM EAKRQRKTQG DSQDIWSYQQ QAALTWLARQ GEQNGFTLRE TSVDAYRQQQ IRREKSRQMI QFSSVDYTGV LVLNDPVLFL QRLAQGYGKS RAFGCGMMMI KPGDDA
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