Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3012 |
Symbol | spaP |
ID | 6796641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2942197 |
End bp | 2942871 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642777178 |
Product | surface presentation of antigens protein SpaP |
Protein accession | YP_002147787 |
Protein GI | 197248290 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4790] Type III secretory pathway, component EscR |
TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGAATG ATATCTCATT AATTGCCTTA CTGGCATTTT CCACCCTGTT GCCATTTATT ATTGCGTCAG GAACCTGTTT CGTTAAATTT TCTATTGTAT TTGTCATGGT GCGTAACGCC CTGGGATTGC AGCAGATACC TTCAAATATG ACGCTTAACG GCGTCGCATT GCTGCTTTCT ATGTTTGTTA TGTGGCCCAT AATGCATGAT GCCTACGTCT ATTTTGAGGA CGAAGATGTC ACCTTTAATG ATATTTCGTC ATTAAGTAAA CACGTTGATG AAGGTCTGGA TGGTTATCGC GATTATCTGA TCAAATATTC AGATCGCGAG TTAGTCCAGT TTTTTGAAAA CGCGCAACTG AAGCGTCAGT ATGGAGAAGA GACCGAGACG GTAAAGCGTG ACAAAGATGA AATTGAAAAA CCATCAATAT TTGCGTTATT ACCTGCTTAT GCGCTGAGCG AAATAAAAAG CGCGTTTAAA ATTGGTTTTT ATCTCTATTT ACCCTTTGTC GTCGTCGACC TGGTGGTATC CAGCGTGCTA CTGGCGCTGG GGATGATGAT GATGAGTCCG GTGACGATAT CTACACCTAT TAAGCTGGTG CTTTTTGTCG CGCTTGATGG CTGGACCTTA CTGTCTAAGG GATTGATATT ACAGTATATG GACATTGCAA CATGA
|
Protein sequence | MGNDISLIAL LAFSTLLPFI IASGTCFVKF SIVFVMVRNA LGLQQIPSNM TLNGVALLLS MFVMWPIMHD AYVYFEDEDV TFNDISSLSK HVDEGLDGYR DYLIKYSDRE LVQFFENAQL KRQYGEETET VKRDKDEIEK PSIFALLPAY ALSEIKSAFK IGFYLYLPFV VVDLVVSSVL LALGMMMMSP VTISTPIKLV LFVALDGWTL LSKGLILQYM DIAT
|
| |