Gene SeAg_B3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3009 
Symbol 
ID6795400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp2940059 
End bp2941129 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content44% 
IMG OID642777175 
Productsurface presentation of antigens protein SpaS 
Protein accessionYP_002147784 
Protein GI197247812 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR01404] type III secretion protein, YscU/HrpY family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCGA ATAAAACAGA AAAACCGACT AAAAAACGGC TGGAAGACTC CGCTAAAAAA 
GGCCAGTCAT TTAAAAGTAA AGATCTCATT ATCGCCTGCC TGACGCTGGG AGGAATTGCC 
TATCTGGTGT CGTATGGCTC ATTTAATGAG TTTATGGGGA TAATTAAGAT CATTATTGCG 
GATAATTTTG ATCAGAGCAT GGCTGACTAC AGTTTGGCCG TTTTTGGGAT AGGGTTAAAA 
TATCTGATTC CATTTATGCT GCTCTGCTTA GTGTGTTCCG CATTACCGGC GTTATTACAG 
GCCGGTTTTG TGCTGGCGAC AGAAGCATTA AAACCTAATT TATCGGCGTT AAACCCGGTA 
GAAGGGGCGA AAAAACTTTT TAGTATGCGC ACGGTTAAAG ATACGGTCAA AACCCTACTG 
TATCTCTCAT CCTTTGTGGT GGCCGCCATC ATTTGCTGGA AGAAATATAA GGTTGAAATC 
TTTTCTCAGT TAAATGGCAA TGTTGTGGAT ATTGCCGTCA TTTGGCGTGA GCTTCTTCTC 
GCGTTGGTAT TAACTTGCCT TGCTTGCGCA TTGATTGTCT TATTATTGGA TGCTATTGCG 
GAATATTTCC TGACCATGAA AGATATGAAA ATGGATAAGG AAGAAGTGAA GCGTGAAATG 
AAGGAGCAGG AAGGGAACCC AGAGGTTAAA TCTAAAAGAC GTGAAGTTCA TATGGAAATT 
CTGTCTGAAC AGGTGAAATC CGATATTGAA AACTCACGCC TGATTGTTGC CAACCCCACG 
CATATTACGA TCGGGATTTA TTTTAAACCC GAACTGATGC CGATTCCGAT GATCTCGGTG 
TATGAAACGA ATCAGCGCGC GCTGGCCGTC CGCGCCTATG CGGAGAAGGT TGGCGTACCT 
GTGATCGTCG ATATCAAACT GGCGCGCAGT CTTTTCAAAA CCCATCGCCG TTATGATCTG 
GTGAGTCTGG AAGAAATTGA TGAAGTTTTA CGTCTTCTGG TTTGGCTGGA AGAGGTAGAA 
AACGCGGGCA AAGACGTTAT TCAGCCACAA GAAAACGAGG TACGGCATTG A
 
Protein sequence
MSSNKTEKPT KKRLEDSAKK GQSFKSKDLI IACLTLGGIA YLVSYGSFNE FMGIIKIIIA 
DNFDQSMADY SLAVFGIGLK YLIPFMLLCL VCSALPALLQ AGFVLATEAL KPNLSALNPV 
EGAKKLFSMR TVKDTVKTLL YLSSFVVAAI ICWKKYKVEI FSQLNGNVVD IAVIWRELLL 
ALVLTCLACA LIVLLLDAIA EYFLTMKDMK MDKEEVKREM KEQEGNPEVK SKRREVHMEI 
LSEQVKSDIE NSRLIVANPT HITIGIYFKP ELMPIPMISV YETNQRALAV RAYAEKVGVP 
VIVDIKLARS LFKTHRRYDL VSLEEIDEVL RLLVWLEEVE NAGKDVIQPQ ENEVRH