Gene SeAg_B3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3000 
Symbol 
ID6793485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp2930597 
End bp2932204 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content44% 
IMG OID642777167 
Producteffector protein SptP 
Protein accessionYP_002147776 
Protein GI197248778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00132386 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAATT TAACGTTGTC TTCGTTTTCA AAAGTTGGTG TGTCGAATGA TGCCCGACTT 
TATATTGCTA AGGAAAATAC TGATAAGGCA TATGTTGCGC CTGAAAAATT TTCGTCAAAA 
GTATTAACCT GGCTTGGAAA AATGCCGTTA TTTAAAAACA CTGAAGTGGT GCAAAAACAT 
ACGGAAAATA TCAGAGTACA GGACCAAAAG ATTTTACAGA CATTTCTCCA TGCACTAACG 
GAAAAATATG GGGAAACAGC GGTTAATGAC GCACTGTTAA TGTCCCGTAT AAATATGAAC 
AAACCCCTTA CCCAACGTTT AGCAGTGCAG ATCACGGAGT GTGTAAAAGC TGCTGACGAA 
GGGTTTATAA ACCTTATTAA TATCAAGGAT AATGTTGGTG TCAGGAATGC CGCTTTAGTC 
ATAAAAGGCG GCGATACAAA AGTGGCAGAA AAAAATAACG ATGTTGGAGC AGAAAGTAAG 
CAACCTTTAC TTGATATCGC GCTAAAGGGA CTTAAAAGAA CATTACCGCA ACTGGAACAA 
ATGGATGGAA ATAGCCTGCG AGAAAACTTC CAGGAGATGG CTTCAGGTAA CGGCCCGCTG 
CGTTCATTAA TGACGAATTT ACAGAATTTA AATAAAATTC CAGAGGCTAA ACAACTTAAT 
GATTATGTTA CAACGTTAAC AAATATTCAG GTCGGTGTAG CCCGGTTCTC ACAATGGGGA 
ACCTGTGGAG GAGAGGTTGA GAGGTGGATT GATAAAGCCT CTACTCATGA ATTAACCCAG 
GCTGTAAAAA AAATTCACGT TATTGCTAAA GAACTGAAAA ACGTTACAGC TGAACTTGAG 
AAAATAGAAG CCGGCGCGCC AATGCCACAG ACGATGAGCG GACCGACACT GGGCCTGGCA 
CGGTTTGCGG TCAGCAGCAT TCCAATTAAT CAGCAAACCC AGGTGAAACT GAGCGATGGA 
ATGCCTGTGC CAGTGAATAC GTTAACTTTT GACGGTAAGC CTGTGGCATT AGCCGGTTCG 
TACCCAAAAA ATACGCCGGA TGCGCTGGAA GCGCATATGA AAATGCTTCT TGAAAAAGAA 
TGCTCGTGCC TGGTGGTGTT AACGTCGGAA GATCAGATGC AGGCAAAACA ATTACCACCC 
TATTTCAGAG GGAGCTACAC CTTTGGCGAG GTGCATACCA ACAGCCAAAA AGTGAGCTCA 
GCCAGTCAGG GAGGTGCGGT AGACCAATAC AATATGCAAC TGTCCTGCGG AGAAAAGCAG 
TATACAATCC CGGTATTACA TGTCAAAAAT TGGCCAGATC ACCAGCCGTT ACCGTCTACT 
AATCAGTTAG AATACCTGGC GGATATTGTG AAAAATAGTA ACCAAAATGG CGCGCCGGGA 
CGTAGTTCAT CAGATAAGCA TTTACCGATG ATTCATTGTC TGGGCGGAGT GGGTAGAACC 
GGAACGATGG CGGCGGCCCT TGTACTTAAG GATAATCCTC ATAGTAATCT GGAGCAGGTA 
CGTGCAGATT TCCGGGATTC ACGGAACAAT AGAATGCTGG AAGACGCCTC ACAGTTTGTA 
CAACTAAAAG CAATGCAAGC CCAGCTGCTT ATGACGACGG CAAGCTGA
 
Protein sequence
MNNLTLSSFS KVGVSNDARL YIAKENTDKA YVAPEKFSSK VLTWLGKMPL FKNTEVVQKH 
TENIRVQDQK ILQTFLHALT EKYGETAVND ALLMSRINMN KPLTQRLAVQ ITECVKAADE 
GFINLINIKD NVGVRNAALV IKGGDTKVAE KNNDVGAESK QPLLDIALKG LKRTLPQLEQ 
MDGNSLRENF QEMASGNGPL RSLMTNLQNL NKIPEAKQLN DYVTTLTNIQ VGVARFSQWG 
TCGGEVERWI DKASTHELTQ AVKKIHVIAK ELKNVTAELE KIEAGAPMPQ TMSGPTLGLA 
RFAVSSIPIN QQTQVKLSDG MPVPVNTLTF DGKPVALAGS YPKNTPDALE AHMKMLLEKE 
CSCLVVLTSE DQMQAKQLPP YFRGSYTFGE VHTNSQKVSS ASQGGAVDQY NMQLSCGEKQ 
YTIPVLHVKN WPDHQPLPST NQLEYLADIV KNSNQNGAPG RSSSDKHLPM IHCLGGVGRT 
GTMAAALVLK DNPHSNLEQV RADFRDSRNN RMLEDASQFV QLKAMQAQLL MTTAS