| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2981 |
|---|
| Symbol | |
|---|
| ID | 6797177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 2912219 |
|---|
| End bp | 2914297 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642777149 |
|---|
| Product | formate hydrogenlyase transcriptional activator |
|---|
| Protein accession | YP_002147758 |
|---|
| Protein GI | 197250657 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTATA CACCCATGAG CGATCTTGGA CAGCAAGGCT TGTTCGATAT CACTCGTACC
TTATTGCAGC AGCCCGATTT GGCGTCGCTC AGTGAAGCGC TTTCACAACT GGTAAAGCGT
TCAGCGCTCG CCGACAGCGC CGGCATTGTG CTATGGCAGG CGCTGTCGCA ACGCGCACAA
TATTATGCGA CGCGAGAAAA TGGCCGTCCT GTTGAATATG AAGATGAAAC CGTACTGGCG
CACGGCCCGG TACGTCGCAT CCTTTCTCGC CCCGATGCAT TGCACTGTAA TTTCCATGAG
TTTACCGAAA CCTGGCCGCA GCTTGCCGCG AGCGGCCTCT ACCCTGAATT TGGTCATTAC
TGTCTGCTTC CTTTAGCCGC GGAGGGCCGT ATTTTCGGCG GCTGCGAATT CATCCGTCAG
GAAGATCGCC CCTGGAGTGA AAAGGAATAT GACCGTCTGC ATACGTTTAC CCAAATTGTC
GGCGTGGTCG CCGAGCAAAT TCAAAACCGG GTAAACAATA ATGTCGATTA TGATCTGTTG
TGCCGCGAAC GCGATAACTT CCGTATTCTG GTTGCGATTA CCAACGCCGT CCTGTCGCGT
CTGGATATTG ATGAGCTGGT AAGCGAAGTC GCAAAAGAGA TCCACCACTA TTTCAATATC
GACGCAATCA GCATCGTGTT GCGCAGCCAT CGCAAAAATA AGCTGAATAT CTACTCCACC
CACTACCTTG ATGAGCATCA TCCGGCGCAC GAACAGAGCG AAGTCGACGA AGCTGGCACG
CTCACGGAGC GCGTCTTTAA AAGTAAAGAG ATGCTGCTTA TCAACCTCAA CGAACGCGAT
CCGCTTGCCC CCTACGAACG CATGCTGTTC GATACCTGGG GCAATCAGAT CCAGACGCTT
TGCCTGCTGC CGTTGATGTC CGGCAAGACG ATGCTTGGCG TGCTCAAACT GGCGCAGTGC
GAAGAAAAAG TGTTTACCAC CGCCAACCTC AAGCTGCTGC GTCAGATTGC CGAACGGGTA
GCCATTGCCG TGGATAATGC GCTGGCCTAT CAGGAAATCC ACCGTCTGAA GGAACGCCTG
GTCGACGAAA ACCTGGCGCT CACGGAGCAG CTTAATAACG TCGACAGCGA GTTTGGCGAG
ATCATCGGAC GCAGCGAAGC GATGTACAAC GTGCTCAAGC AGGTTGAGAT GGTGGCGCAG
AGCGACAGTA CCGTGCTGAT TCTGGGCGAA ACGGGAACCG GTAAAGAGTT GATTGCCCGC
GCCATTCACA ACCTGAGCGG ACGTAGCGGG CGCAGGATGG TAAAGATGAA CTGCGCCGCG
ATGCCGGCGG GGCTGCTGGA AAGCGATTTG TTTGGTCATG AGCGCGGCGC GTTTACCGGC
GCCAGCGCGC AGCGGATTGG CCGTTTCGAG CTGGCGGATA AAAGCTCGCT GTTTCTGGAT
GAAGTGGGCG ACATGCCGCT GGAGCTACAG CCTAAGCTGC TGCGCGTCCT TCAGGAGCAA
GAGTTTGAAC GTCTCGGCAG CAATAAACTG ATCCAGACCG ACGTGCGGCT GATCGCCGCG
ACTAACCGCG ATCTGAAAAA AATGGTCGCC GATCGCGAAT TCCGTAACGA TCTCTACTAT
CGGCTGAATG TTTTTCCGAT CCAACTTCCT CCGTTACGCG AACGTCCGGA AGATATTCCA
CTACTGGTCA AAGCGTTCAC TTTCAAAATC GCCCGCCGAA TGGGGCGTAA TATCGACAGC
ATTCCCGCCG AAACGCTGCG CACGCTCAGC AGCATGGAAT GGCCGGGGAA CGTTCGCGAG
CTGGAGAATG TCGTCGAGCG CGCCGTGCTG CTGACGCGCG GCAATGTGCT ACAACTGTCG
CTGCCGGATA TTACCGCCGT AACGCCCGAT ACCTCGCCTG TTGCGACTGA AAGCGCCAAA
GAAGGCGAAG ATGAATATCA GCTTATTATA CGCGTGCTGA AAGAGACCAA TGGCGTAGTG
GCTGGACCAA AAGGCGCGGC GCAGCGTCTG GGGCTTAAAC GAACCACCCT GCTGTCGCGT
ATGAAGCGAT TGGGTATTGA TAAAGACGCG TTAGTGTAA
|
|---|
| Protein sequence | MSYTPMSDLG QQGLFDITRT LLQQPDLASL SEALSQLVKR SALADSAGIV LWQALSQRAQ
YYATRENGRP VEYEDETVLA HGPVRRILSR PDALHCNFHE FTETWPQLAA SGLYPEFGHY
CLLPLAAEGR IFGGCEFIRQ EDRPWSEKEY DRLHTFTQIV GVVAEQIQNR VNNNVDYDLL
CRERDNFRIL VAITNAVLSR LDIDELVSEV AKEIHHYFNI DAISIVLRSH RKNKLNIYST
HYLDEHHPAH EQSEVDEAGT LTERVFKSKE MLLINLNERD PLAPYERMLF DTWGNQIQTL
CLLPLMSGKT MLGVLKLAQC EEKVFTTANL KLLRQIAERV AIAVDNALAY QEIHRLKERL
VDENLALTEQ LNNVDSEFGE IIGRSEAMYN VLKQVEMVAQ SDSTVLILGE TGTGKELIAR
AIHNLSGRSG RRMVKMNCAA MPAGLLESDL FGHERGAFTG ASAQRIGRFE LADKSSLFLD
EVGDMPLELQ PKLLRVLQEQ EFERLGSNKL IQTDVRLIAA TNRDLKKMVA DREFRNDLYY
RLNVFPIQLP PLRERPEDIP LLVKAFTFKI ARRMGRNIDS IPAETLRTLS SMEWPGNVRE
LENVVERAVL LTRGNVLQLS LPDITAVTPD TSPVATESAK EGEDEYQLII RVLKETNGVV
AGPKGAAQRL GLKRTTLLSR MKRLGIDKDA LV
|
|---|
| |