| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2775 |
|---|
| Symbol | |
|---|
| ID | 6793950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 2720094 |
|---|
| End bp | 2720831 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642776952 |
|---|
| Product | outer membrane protein assembly complex subunit YfiO |
|---|
| Protein accession | YP_002147566 |
|---|
| Protein GI | 197248037 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000251049 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA TGAAATATCT GGTGGCAGCA GCCACGTTGA GCCTGTTTCT GGCGGGTTGC
TCGGGTTCAA AGGAAGAGGT GCCCGATAAT CCGCCGAATG AAATCTACGC GACTGCTCAG
CAAAAGCTGC AGGACGGTAA CTGGAAACAG GCAATAACGC AATTGGAAGC GTTAGATAAT
CGTTATCCAT TCGGACCGTA TTCTCAGCAG GTGCAGTTGG ATCTTATCTA CGCCTATTAC
AAAAACGCCG ATTTGCCGCT AGCGCAGGCC GCCATCGATC GTTTTATGCG TCTTAATCCA
ACGCACCCTA ATATTGACTA TGTCATGTAC ATGCGCGGCC TGACGAACAT GGCGCTGGAT
GATAGCGCGC TGCAGGGTTT CTTTGGCGTC GATCGCAGCG ATCGCGATCC GCAACATGCG
CGGGCGGCGT TCAATGACTT TTCGAAACTG GTACGCAGCT ATCCTAATAG CCAGTACACC
ACCGACGCCA CTAAGCGTCT GGTATTCCTG AAAGACCGTC TGGCGAAATA TGAATATTCC
GTCGCAGAGT ACTATACCGC GCGCGGCGCA TGGGTTGCGG TCGTAAACCG GGTAGAAGGT
ATGCTACGCA ATTATCCTGA TACGCAGGCC ACGCGCGATG CGTTGCCGCT GATGGAAAAC
GCCTATCGTC AGATGCAGCT GAATGCGCAG GCTGACAAAG TCGCGAAAAT TATTGCCGCT
AACAGCAAAA ACACCTGA
|
|---|
| Protein sequence | MTRMKYLVAA ATLSLFLAGC SGSKEEVPDN PPNEIYATAQ QKLQDGNWKQ AITQLEALDN
RYPFGPYSQQ VQLDLIYAYY KNADLPLAQA AIDRFMRLNP THPNIDYVMY MRGLTNMALD
DSALQGFFGV DRSDRDPQHA RAAFNDFSKL VRSYPNSQYT TDATKRLVFL KDRLAKYEYS
VAEYYTARGA WVAVVNRVEG MLRNYPDTQA TRDALPLMEN AYRQMQLNAQ ADKVAKIIAA
NSKNT
|
|---|
| |