Gene SeAg_B2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B2675 
SymbolispG 
ID6794920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp2616669 
End bp2617787 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content55% 
IMG OID642776859 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_002147476 
Protein GI197250399 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAACC AGGCTCCGAT TCAACGTAGA AAATCGACAC GTATTTACGT TGGGAATGTG 
CCGATTGGCG ATGGCGCCCC CATCGCCGTC CAGTCGATGA CTAACACGCG TACCACTGAC 
GTGGAAGCGA CGGTTAATCA GATCAAAGCG CTGGAGCGCG TTGGCGCAGA TATTGTTCGT 
GTTTCTGTAC CGACCATGGA CGCCGCCGAA GCGTTTAAAC TTATCAAACA GCAGGTTTCA 
GTTCCGCTGG TTGCCGATAT TCACTTCGAC TACCGCATTG CGCTGAAGGT GGCGGAATAC 
GGCGTTGACT GCTTGCGTAT CAACCCCGGC AATATCGGTA ACGAAGAACG TATTCGTATG 
GTGGTGGACT GCGCGCGCGA CAAAAACATC CCTATTCGTA TCGGCGTAAA TGCCGGATCG 
CTGGAAAAAG ATCTGCAGGA AAAATACGGT GAGCCGACGC CGCAGGCGCT GCTGGAATCA 
GCCATGCGCC ATGTCGATCA TCTCGATCGT CTCAACTTTG ATCAGTTCAA AGTGAGCGTA 
AAAGCGTCCG ATGTATTCCT TGCCGTTGAG TCTTATCGTT TGTTGGCTAA ACAGATCGAT 
CAGCCGCTGC ATCTGGGGAT CACCGAAGCG GGCGGCGCGC GTAGCGGGGC GGTCAAGTCG 
GCGATCGGTT TAGGTCTGCT GTTATCGGAA GGCATCGGCG ACACGCTGCG CGTATCGTTG 
GCGGCCGATC CGGTGGAAGA GATCAAAGTC GGTTTCGATA TCCTGAAGTC GCTGCGCATT 
CGCGCGCGCG GCATCAATTT CATCGCTTGC CCGACCTGTT CTCGCCAGGA GTTCGACGTT 
ATCGGCACGG TGAACGCGCT GGAGCAGCGT CTGGAAGATA TCATCACCCC GATGGACGTC 
TCGATCATCG GTTGCGTGGT GAACGGGCCG GGCGAAGCGC TGGTATCGAC GCTGGGCGTG 
ACGGGCGGCA ATAAGAAAAG CGGCCTGTAT GAAGACGGCG TGCGCAAGGA CAGACTCGAT 
AACGACGATA TGATCGCGCA GCTTGAATCC CGTATTCGCG CGAAAGCAAG TCAACTTGAT 
GAAGCGCGTC GGATTGACGT GCTGCAGGTT GAAAAATAA
 
Protein sequence
MHNQAPIQRR KSTRIYVGNV PIGDGAPIAV QSMTNTRTTD VEATVNQIKA LERVGADIVR 
VSVPTMDAAE AFKLIKQQVS VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRM 
VVDCARDKNI PIRIGVNAGS LEKDLQEKYG EPTPQALLES AMRHVDHLDR LNFDQFKVSV 
KASDVFLAVE SYRLLAKQID QPLHLGITEA GGARSGAVKS AIGLGLLLSE GIGDTLRVSL 
AADPVEEIKV GFDILKSLRI RARGINFIAC PTCSRQEFDV IGTVNALEQR LEDIITPMDV 
SIIGCVVNGP GEALVSTLGV TGGNKKSGLY EDGVRKDRLD NDDMIAQLES RIRAKASQLD 
EARRIDVLQV EK