| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2645 |
|---|
| Symbol | upp |
|---|
| ID | 6795962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2576081 |
|---|
| End bp | 2576707 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642776834 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_002147451 |
|---|
| Protein GI | 197248587 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0438743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG TGGAAGTCAA ACACCCACTC GTCAAACACA AGCTGGGTCT GATGCGTGAA
AACGACATTA GCACTAAACG CTTTCGTGAA CTCGCCTCAG AAGTAGGCAG CCTGCTGACG
TATGAAGCGA CAGCCGACCT GGAAACGGAA AAAGTCACCA TCGAAGGCTG GAATGGCCCG
GTGGAAATCG ACCAGATCAA AGGTAAAAAA ATTACCGTTG TGCCGATTCT GCGCGCGGGT
CTGGGTATGA TGGAAGGCGT TCTGGAAAAT GTACCGAGCG CGCGTATCAG CGTAGTCGGG
ATGTACCGTA ACGAAGAGAC GCTTGAGCCA GTACCTTATT TCCAGAAACT GGTATCGAAC
ATTGATGAGC GCATGGCGCT GATCGTCGAC CCGATGCTGG CGACCGGCGG TTCTGTCATC
GCGACCATCG ACCTGCTGAA AAAAGCAGGC TGTAGCAGCA TTAAGGTGCT GGTGCTGGTC
GCCGCGCCGG AAGGCATTGC AGCGCTGGAA AAAGCGCACC CGGACGTTGA ACTGTACACC
GCCTCTATCG ATCAGGGGCT TAACGAGCAC GGATACATTA TTCCGGGGCT TGGCGATGCC
GGCGATAAGA TTTTTGGTAC CAAATAA
|
|---|
| Protein sequence | MKIVEVKHPL VKHKLGLMRE NDISTKRFRE LASEVGSLLT YEATADLETE KVTIEGWNGP
VEIDQIKGKK ITVVPILRAG LGMMEGVLEN VPSARISVVG MYRNEETLEP VPYFQKLVSN
IDERMALIVD PMLATGGSVI ATIDLLKKAG CSSIKVLVLV AAPEGIAALE KAHPDVELYT
ASIDQGLNEH GYIIPGLGDA GDKIFGTK
|
|---|
| |