| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2580 |
|---|
| Symbol | pdxK |
|---|
| ID | 6794276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2508909 |
|---|
| End bp | 2509775 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642776772 |
|---|
| Product | pyridoxal kinase |
|---|
| Protein accession | YP_002147389 |
|---|
| Protein GI | 197248803 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
|---|
| TIGRFAM ID | [TIGR00687] pyridoxal kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0656923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAAG AGAGTGATAT TCAGTCAGTG CTCTTCGACG ACAACCATCG GGCGTTACAG
ACCGATATCG TCGCCGTCCA GTCACAGGTC GTGTACGGCA GCGTAGGCAA CAGTATCGCT
GTTCCGGCCA TTAAAGCGCA GGGATTACGC GTGACGGCGG TCCCGACGGT GCTGTTCAGC
AATACGCCGC ACTATAAAAC CTTTTATGGC GGCATTATTC CCGCCGAGTG GTTTGCAGGC
TACCTTACGG CGTTGAATGA GCGCGATGCG CTACGTGAAT TAAAAGCGAT TACCACCGGT
TACATGGGCA GCGCAGACCA AATTGTCTTG CTTTCGAAGT GGCTAATGGC GATCCGGGCT
TCGCATCCGG AGGTGTGTAT TCTTGTCGAT CCGGTCATTG GCGATACCGA CAGTGGAATG
TATGTGCAGG CGGAAATTCC GCAGGCTTAT CGCACATATT TACTGCCGCA GGCGCAGGGG
CTAACGCCGA ACGTATTTGA GCTGGAGATG CTGAGTGGTA AACCGTGTCG CACGCTGGAA
GAGGCGGTGG CGGCGGCGCA ATCGCTGCTT TCCGATACGC TGAAATGGGT GGTTATCACC
AGCGCGCCGG GTGAATCTCT GGAGACCATA ACGGTTGCCG TCGTTACCGC GCAGGTCGTG
GAGGTCTTTG CTCATCCGCG GGTGGCGACG GAGTTAAAAG GGACGGGAGA TCTCTTCTGC
GCCGAGCTGG TCAGCGGTAT TGTGCAGGGA AAAAAACTGA CGACCGCGGC AAAAGATGCG
GCGCAGCGCG TGCTGGAGGT GATGACCTGG ACACAGCAGT GTGGCTGTGA TGAGTTAATT
CTGCCGCCGG CAGGGGAGGC GCGATGA
|
|---|
| Protein sequence | MGQESDIQSV LFDDNHRALQ TDIVAVQSQV VYGSVGNSIA VPAIKAQGLR VTAVPTVLFS
NTPHYKTFYG GIIPAEWFAG YLTALNERDA LRELKAITTG YMGSADQIVL LSKWLMAIRA
SHPEVCILVD PVIGDTDSGM YVQAEIPQAY RTYLLPQAQG LTPNVFELEM LSGKPCRTLE
EAVAAAQSLL SDTLKWVVIT SAPGESLETI TVAVVTAQVV EVFAHPRVAT ELKGTGDLFC
AELVSGIVQG KKLTTAAKDA AQRVLEVMTW TQQCGCDELI LPPAGEAR
|
|---|
| |