| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2563 |
|---|
| Symbol | |
|---|
| ID | 6795903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2493748 |
|---|
| End bp | 2494632 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642776755 |
|---|
| Product | DNA-binding transcriptional activator XapR |
|---|
| Protein accession | YP_002147372 |
|---|
| Protein GI | 197250656 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000012261 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAG CCCATCGTAT TGATCTAAAG CTATTACGTT ATTTCCTCGC TGTTGCAGAA
GAATTGCATT TTGGCCGGGC TGCTGCCCGG TTAAATATGT CACAACCTCC CTTGAGTATC
CATATCAAAG AACTTGAACA GCAACTGGGT ACATTGCTGT TTATTCGTCA TTCCCGCAGC
GTTGCATTAA CCCATGCCGG GAAAGTTTTA ATGGAGGAGT CACGTCGCTT GTTAGCCAAT
GCAAATCAGG CGCTGGCGCG AGTGGAGCAG ATTGGTCGCG GTGAAGCGGG GCGCATTGAA
CTGGGTGTGG TTGGTACGGC GCTGTGGGGA AGAATGCGTC CTGCGATGCG TCACTTTTTG
AAAGTAAATC CCAATGTTGA AGTACTTTTT CGCGAAAAGT CTCCAGGTAT GCAAATGGCG
TTGTTAGAGC GTCGGGAACT TGATGCAGGG ATCTGGCGTA TGGCTATCGA ACCGGCAGTC
GGTTTTACCA GCATACGTTT GCATGAATCT GCATTCATGG TTGCAGTTCC GGAAGATCAC
GATCTGGCAT CCAGAGATTC TGTGCCGCTG GCGGCGTTGC GCAATGAATA TTTTGTTACG
TTGCCTTCCG TACATTCTGA TTGGGGATTT TTACAACGTG TATGCCAACA GGCGGGTTTC
TCGCCAATGA TTATTCGGGA AGTGGTTGAG CCGCAAACGG TGTTGGCGAT GATCAGTATG
GGGATCGGGA TTACGTTGAT GGCTGATGGC TATGCGCAAA TGAGCTGGCC GGGTGTGGTG
TTCCGTCCGT TAGAGGAACG TATTCCGGCG GATTTGTATA TTGTGTATGA CCAGCAGCAG
GCAACGCCAG CACTGGAGAA ACTGGTGGCG GCGTTGACGG TATGA
|
|---|
| Protein sequence | MERAHRIDLK LLRYFLAVAE ELHFGRAAAR LNMSQPPLSI HIKELEQQLG TLLFIRHSRS
VALTHAGKVL MEESRRLLAN ANQALARVEQ IGRGEAGRIE LGVVGTALWG RMRPAMRHFL
KVNPNVEVLF REKSPGMQMA LLERRELDAG IWRMAIEPAV GFTSIRLHES AFMVAVPEDH
DLASRDSVPL AALRNEYFVT LPSVHSDWGF LQRVCQQAGF SPMIIREVVE PQTVLAMISM
GIGITLMADG YAQMSWPGVV FRPLEERIPA DLYIVYDQQQ ATPALEKLVA ALTV
|
|---|
| |