Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B2548 |
Symbol | |
ID | 6793355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2481640 |
End bp | 2483292 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642776740 |
Product | indole-3-pyruvate decarboxylase |
Protein accession | YP_002147363 |
Protein GI | 197247765 |
COG category | [G] Carbohydrate transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
TIGRFAM ID | [TIGR03393] indolepyruvate decarboxylase, Erwinia family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.581828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACC CCTATACCGT GGCCGACTAT TTGCTGGACA GACTGGCAGG ATGCGGCATT GGCCATCTTT TTGGCGTACC GGGCGATTAT AACTTGCAGT TTCTTGACCA TGTGATTGAC CACCCGACCT TGCGTTGGGT GGGATGCGCC AATGAGCTGA ACGCCGCTTA TGCCGCGGAC GGCTATGCGC GCATGTCGGG CGCTGGAGCG CTACTCACCA CCTTTGGCGT GGGAGAACTT AGCGCTATTA ACGGTATCGC GGGCAGTTAC GCGGAATATG TCCCGGTCTT GCATATCGTC GGCGCGCCTT GTAGCGCTGC GCAGCAGCGT GGCGAATTGA TGCACCATAC CCTCGGCGAC GGCGATTTTC GTCATTTTTA TCGCATGAGT CAGGCGATAT CCGCTGCCAG CGCAATATTG GATGAACAGA ACGCCTGCTT CGAGATTGAC CGCGTATTGG GTGAAATGCT TGCCGCACGC AGGCCAGGAT ACATCATGTT GCCCGCCGAC GTGGCGAAAA AAACGGCCAT CCCGCCTACG CAGGCGCTGG CGTTGCCCGT GCATGAAGCG CAAAGCGGCG TGGAGACGGC TTTTCGTTAC CACGCCCGTC AGTGCCTGAT GAACAGTCGG CGCATTGCGC TATTGGCCGA CTTTCTTGCC GGGCGTTTTG GTTTACGACC ACTGTTGCAG CGCTGGATGG CGGAAACGCC CATCGCTCAT GCGACACTAC TGATGGGGAA GGGGCTTTTT GATGAACAGC ACCCGAACTT CGTTGGCACC TATAGCGCTG GCGCCAGCAG CAAAGAAGTG CGTCAGGCCA TAGAGGACGC CGATAGGGTT ATCTGCGTCG GCACCCGTTT TGTCGATACC CTTACGGCCG GATTTACCCA ACAATTGCCG GCGGAACGCA CGCTGGAGAT TCAGCCTTAC GCGTCGCGCA TCGGCGAAAC CTGGTTCAAC CTCCCGATGG CGCAGGCGGT GTCTACGCTG CGCGAACTGT GCCTGGAATG CGCTTTTGCG CCGCCGCCGA CGCGTTCCGC CGGACAGCCA GTGCGGATTG ATAAAGGAGA ACTGACCCAG GAAAGCTTCT GGCAAACCTT ACAGCAGTAT CTCAAACCCG GCGATATTGT CCTTGTCGAC CAGGGGACCG CCGCCTTTGG CGCTGCCGCG CTGTCGCTTC CTGACGGCGC GGAAGTTGTG GTTCAGCCGC TGTGGGGGTC TATCGGCTAT TCCTTGCCCG CCGCGTTTGG CGCGCAAACC GCCTGCCCCG ATCGGCGGGT AATTCTGATT ATTGGCGATG GCGCGGCGCA GCTCACGATT CAGGAGATGG GCTCGATGTT ACGCGACGGG CAGGCGCCGG TTATCCTGCT GCTCAACAAT GACGGCTATA CCGTAGAGCG CGCCATTCAC GGCGCGGCCC AGCGGTATAA CGACATCGCG AGCTGGAACT GGACGCAGAT ACCACCGGCG CTAAACGCGG CGCAACAGGC GGAGTGCTGG CGGGTGACGC AGGCTATCCA ACTGGCAGAG GTCCTCGAAC GGTTGGCGCG CCCACAACGT CTGTCATTTA TTGAAGTGAT GTTGCCAAAA GCCGATCTGC CGGAATTACT GCGTACCGTG ACCCGGGCGC TGGAAGCCCG CAACGGGGGA TAA
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Protein sequence | MQNPYTVADY LLDRLAGCGI GHLFGVPGDY NLQFLDHVID HPTLRWVGCA NELNAAYAAD GYARMSGAGA LLTTFGVGEL SAINGIAGSY AEYVPVLHIV GAPCSAAQQR GELMHHTLGD GDFRHFYRMS QAISAASAIL DEQNACFEID RVLGEMLAAR RPGYIMLPAD VAKKTAIPPT QALALPVHEA QSGVETAFRY HARQCLMNSR RIALLADFLA GRFGLRPLLQ RWMAETPIAH ATLLMGKGLF DEQHPNFVGT YSAGASSKEV RQAIEDADRV ICVGTRFVDT LTAGFTQQLP AERTLEIQPY ASRIGETWFN LPMAQAVSTL RELCLECAFA PPPTRSAGQP VRIDKGELTQ ESFWQTLQQY LKPGDIVLVD QGTAAFGAAA LSLPDGAEVV VQPLWGSIGY SLPAAFGAQT ACPDRRVILI IGDGAAQLTI QEMGSMLRDG QAPVILLLNN DGYTVERAIH GAAQRYNDIA SWNWTQIPPA LNAAQQAECW RVTQAIQLAE VLERLARPQR LSFIEVMLPK ADLPELLRTV TRALEARNGG
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