| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2446 |
|---|
| Symbol | |
|---|
| ID | 6793752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2368877 |
|---|
| End bp | 2370172 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642776642 |
|---|
| Product | menaquinone-specific isochorismate synthase |
|---|
| Protein accession | YP_002147266 |
|---|
| Protein GI | 197247503 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.22501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATTCTA TTACTACTGC GCTGGAAAAT CTGACGCGTC AGCTATCGCA AGAGATACCG
GCGACGCCAG GGCTTTGCAT TTTCGATGCG CCTTTCCCTT TAAACGATGC CTTCGATGCA
TTGAGCTGGC TGGCCAGCCA GTCATCCTTT CCGCAATTCT ACTGGCAACA GCGTAATGGC
GACGAAGAAG CTGCCGTTCT CGGGGCCATC ACCGTCTTTT CATCGCTCGA TCTGGCGCAA
CGGTTTTTAC GTCAGCACGC GCAGCCTGAT CTGCGTATTT GGGGGCTGAA TGCGTTCGAG
CCGAAAGAGG GCTACTTATT GCTGCCACGG CTGGAGTGGC GACGTAGCGG GGGTACGGCG
ACCTTACGCT TACATCTGCA CAGTGACGTT TCGCTACGCG ATGATGCGCG CCAGGCGAAA
GCGTTTCTCG CTTCTCTGGT CGGTATTAAG CCTGTTCCGG CGCTGCGCCT TTCGCTCACG
AGCGAACAAC ACTGGCCGGA CAAAGACGGT TGGGTGAAGC TGATTCAGCA GGCCACCCAC
ACCATTGCGC AAGAGGCGTT TGATAAAGTT GTGCTGGCGC GGGCCACCGA CTTACAATTC
TCCCGTCCGG TCAATGCCGC CGCGATGATG GCGTCCAGTC GTCGTTTAAA TCTCAACTGC
TACCACTTTT TTATGGCCTT TTCCGCCGAT ACCGCCTTTT TGGGATCATC GCCGGAGCGG
CTCTGGCGGC GGCGTGAAAC GGCGCTGCGT ACCGAAGCGC TGGCCGGGAC GGTGGCGAAC
CATCCGGATA ACCATAAAGC CTGGCAGCTT GGCGAATGGT TAATGAAAGA CGATAAAAAC
CAGCGAGAAA ATATGCTGGT TGTCGAAGAC ATCTGCCAGC GACTGCAAAA CTGCACCCAC
TCGCTGGATG TGCTGCCGCC GCAGGTGCTC AGACTGCGCA AGGTACAGCA TTTGCGCCGC
TGTATCTGGA CGGCGCTTAA TCAGGCGGAC GACACGCTCT GCCTGCACCA GTTACAGCCT
ACCGCAGCGG TCGCCGGGAT CCCTCGTGAA CCCGCGCGTT GTTTTATAGA ACAACATGAG
CCGTTCGAAC GTGAATGGTA TGCCGGGTCG GCAGGCTATC TCTCCACGCG GCAAAGTGAG
TTTTGCGTGA CGTTACGTTC AGCCAAAGTG ACGGCCAATG TGGTGCGATT GTATGCCGGC
GCGGGAATCG TCCGCGGCTC CGATCCGGAA CAGGAATGGC AGGAAATAGA TAATAAAGCG
GCCGGGTTAC GTACCTTATT GCAGATGGAT GCGTAA
|
|---|
| Protein sequence | MHSITTALEN LTRQLSQEIP ATPGLCIFDA PFPLNDAFDA LSWLASQSSF PQFYWQQRNG
DEEAAVLGAI TVFSSLDLAQ RFLRQHAQPD LRIWGLNAFE PKEGYLLLPR LEWRRSGGTA
TLRLHLHSDV SLRDDARQAK AFLASLVGIK PVPALRLSLT SEQHWPDKDG WVKLIQQATH
TIAQEAFDKV VLARATDLQF SRPVNAAAMM ASSRRLNLNC YHFFMAFSAD TAFLGSSPER
LWRRRETALR TEALAGTVAN HPDNHKAWQL GEWLMKDDKN QRENMLVVED ICQRLQNCTH
SLDVLPPQVL RLRKVQHLRR CIWTALNQAD DTLCLHQLQP TAAVAGIPRE PARCFIEQHE
PFEREWYAGS AGYLSTRQSE FCVTLRSAKV TANVVRLYAG AGIVRGSDPE QEWQEIDNKA
AGLRTLLQMD A
|
|---|
| |