| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2403 |
|---|
| Symbol | |
|---|
| ID | 6796632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2316926 |
|---|
| End bp | 2318062 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642776600 |
|---|
| Product | outer membrane porin protein C |
|---|
| Protein accession | YP_002147224 |
|---|
| Protein GI | 197249611 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00624536 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA AAGTACTGTC CCTCCTGGTA CCAGCTCTGC TGGTGGCGGG CGCAGCGAAT
GCGGCTGAAA TTTATAATAA AGACGGCAAC AAATTAGACC TGTTTGGTAA AGTTGATGGC
CTGCACTACT TCTCTGACGA CAAAGGCAGC GACGGCGACC AGACCTACAT GCGTATCGGC
TTCAAAGGCG AAACGCAGGT TAACGATCAG CTGACCGGTT ATGGCCAGTG GGAATATCAG
ATTCAGGGCA ACCAGACTGA AGGCAGCAAC GACTCCTGGA CGCGTGTGGC GTTTGCGGGT
CTGAAATTCG CTGACGCAGG TTCCTTCGAT TATGGTCGTA ACTACGGCGT AACCTATGAT
GTGACCTCCT GGACCGATGT TCTGCCGGAG TTCGGCGGCG ACACCTACGG CGCTGACAAC
TTTATGCAGC AGCGTGGTAA CGGCTATGCC ACTTACCGTA ACACCGACTT CTTCGGCCTG
GTGGATGGCC TGGACTTCGC GTTGCAGTAT CAGGGCAAAA ACGGCAGCGT GAGCGGTGAA
AACACCAACG GTCGCAGCCT GCTGAACCAG AACGGTGACG GTTACGGCGG ATCGCTGACT
TATGCAATCG GCGAAGGCTT CTCTGTCGGT GGCGCTATCA CCACGTCTAA ACGTACTGCC
GATCAGAACA ACACCGCTGA CGAACACCTG TATGGTAACG GCGATCGCGC TACGGTCTAC
ACCGGCGGCC TGAAATACGA TGCGAACAAC ATCTATCTGG CAGCGCAGTA TTCTCAGACC
TATAACGCAA CCCGTTTTGG TACCTCTAAC GGCAACAATA AGTCCACCTC TTACGGTTTT
GCCAACAAAG CGCAGAACTT TGAAGTGGTT GCTCAGTACC AGTTCGACTT TGGTCTGCGT
CCGTCTGTGG CTTACCTGCA GTCTAAAGGT AAGGACATCA GCAACGGCTA CGGCGCCAGC
TATGGCGACC AGGACATCGT AAAATATGTT GATGTCGGCG CGACTTACTA CTTCAACAAA
AACATGTCCA CCTATGTTGA TTACAAAATC AACCTGCTGG ATAAAAACGA CTTTACTCGC
GATGCGGGCA TCAACACCGA CGACATCGTA GCGCTGGGTC TGGTTTACCA GTTCTAA
|
|---|
| Protein sequence | MKVKVLSLLV PALLVAGAAN AAEIYNKDGN KLDLFGKVDG LHYFSDDKGS DGDQTYMRIG
FKGETQVNDQ LTGYGQWEYQ IQGNQTEGSN DSWTRVAFAG LKFADAGSFD YGRNYGVTYD
VTSWTDVLPE FGGDTYGADN FMQQRGNGYA TYRNTDFFGL VDGLDFALQY QGKNGSVSGE
NTNGRSLLNQ NGDGYGGSLT YAIGEGFSVG GAITTSKRTA DQNNTADEHL YGNGDRATVY
TGGLKYDANN IYLAAQYSQT YNATRFGTSN GNNKSTSYGF ANKAQNFEVV AQYQFDFGLR
PSVAYLQSKG KDISNGYGAS YGDQDIVKYV DVGATYYFNK NMSTYVDYKI NLLDKNDFTR
DAGINTDDIV ALGLVYQF
|
|---|
| |