| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2320 |
|---|
| Symbol | |
|---|
| ID | 6796949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2236314 |
|---|
| End bp | 2237309 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642776521 |
|---|
| Product | tRNA-dihydrouridine synthase C |
|---|
| Protein accession | YP_002147146 |
|---|
| Protein GI | 197250762 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTCATCG CAGAGAGGCG TTATGATAGC GCCTCTTTTT TTGCTGTGGA TACCGATATG
CGTGTTTTAC TGGCGCCGAT GGAAGGCGTG CTCGACGCGT TAGTGCGCGA GCTGCTGACC
GAAGTGAATG ATTACGATCT CTGCATCACC GAATTTGTGC GCGTGGTGGA TCAGCTGCTG
CCGGTAAAAG TGTTTCATCG CATCTGCCCG GAGTTGCATC ACGCCAGCCG CACGCCGTCC
GGCACGCCGG TGCGTATTCA GCTTCTGGGC CAGTATCCGC AGTGGCTGGC GGAAAACGCC
GCGCGGGCGA CGGCGTTGGG ATCGTATGGC GTGGACCTGA ACTGCGGCTG TCCGTCAAAA
GTGGTGAACG GCAGCGGCGG CGGCGCGACA TTGCTCAAAG ATCCCGAACT CATCTATCAG
GGCGCGAAAG CGATGCGGGC CGCGGTACCG TCGCATCTGC CGGTGACGGT AAAAGTGCGT
CTCGGCTGGG ATAGCGGCGA TAGAAAATTT GAAATCGCCG ATGCGGTGCA GCAGGCCGGC
GCCAGTGAAC TGGTGGTGCA TGGCCGTACT AAAGCGCAGG GCTACCGCGC CGAGCATATC
GACTGGCAGG CGATCGGCGA AATACGCCAG CGTCTGACTA TTCCGGTTAT CGCGAATGGC
GAAATCTGGG ACTGGCAGAG CGCGCAGGCA TGTATGGCGA CCAGCGGCTG CGATGCGGTG
ATGATTGGCC GTGGGGCGTT AAATATTCCT AACCTGAGCC GGGTGGTGAA GTATAACGAA
CCGCGTATGC CGTGGCCGGA AGTGGTGACG TTATTACAAA AATATACCCG GCTGGAAAAG
CAGGGCGATA CCGGTTTATA CCATGTCGCG CGTATTAAAC AGTGGTTGGG ATATTTACGT
AAGGAATATA TTGAGGCGAC GGAACTCTTT CAGTCGATTC GGGCGTTAAA CCGTTCGTCC
GAGATTGCGC GGGCGATTCA GGCTATTAAA ATCTAA
|
|---|
| Protein sequence | MLIAERRYDS ASFFAVDTDM RVLLAPMEGV LDALVRELLT EVNDYDLCIT EFVRVVDQLL
PVKVFHRICP ELHHASRTPS GTPVRIQLLG QYPQWLAENA ARATALGSYG VDLNCGCPSK
VVNGSGGGAT LLKDPELIYQ GAKAMRAAVP SHLPVTVKVR LGWDSGDRKF EIADAVQQAG
ASELVVHGRT KAQGYRAEHI DWQAIGEIRQ RLTIPVIANG EIWDWQSAQA CMATSGCDAV
MIGRGALNIP NLSRVVKYNE PRMPWPEVVT LLQKYTRLEK QGDTGLYHVA RIKQWLGYLR
KEYIEATELF QSIRALNRSS EIARAIQAIK I
|
|---|
| |