| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2296 |
|---|
| Symbol | |
|---|
| ID | 6796073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2211947 |
|---|
| End bp | 2212630 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642776497 |
|---|
| Product | gram-negative pilus assembly chaperone |
|---|
| Protein accession | YP_002147122 |
|---|
| Protein GI | 197250315 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TATCTGCAGT ATTATTATCT GCCATAATTT TGCCTGCGCA TGCTGGTATT
GTTATTTATG GTACGCGTGT GATTTACCCG GCAGAGAAGA AAGAAGTCGT TGTACAATTG
GTGAATCAGG GCGAGCAAGC TTCGCTGGTA CAGTCCTGGA TTGATGACGG TAACACTTCA
TTACCGCCAG AAAAAATTCA GGTGCCATTT ATGCTGACGC CGCCAGTGGC GCGCGTTGCC
GCTGAGTCTG GTCAGCAGAT CAAAATCAAG AAAATGCCTA ATAGCTTACC GGACAACAAA
GAAAGTCTGT TTTATCTGAA TGTGCTTGAT ATTCCACCAA ACAGCCAGGA AAACGCCGGT
AAAAATGTGC TTAAATTCGC AATGCAGAAT CGAATAAAAT TAATATGGCG CCCCAGTCGA
ATTGCCGCCG TAACCAAAGA CAGTTTTCAG CGGATTGGTT TATTTCGCAG TAATAAAACT
GTCATCATGA AAAATGATAC TGCAAACTGG ATTACCGTGA CGGATGTAAA AGCAGGAAAT
ACTAAGATTA ATGATCAAAC TATCATGCTG CCACCGCTAT CGACGCAAAA TATTAACATG
AAATATGCGT CAACAAGCCA GTATGAAGTA ACGATTATTG ATGATAATGG TAACTATATT
AGTAGCAAAA TCAATGTAAA ATAA
|
|---|
| Protein sequence | MKILSAVLLS AIILPAHAGI VIYGTRVIYP AEKKEVVVQL VNQGEQASLV QSWIDDGNTS
LPPEKIQVPF MLTPPVARVA AESGQQIKIK KMPNSLPDNK ESLFYLNVLD IPPNSQENAG
KNVLKFAMQN RIKLIWRPSR IAAVTKDSFQ RIGLFRSNKT VIMKNDTANW ITVTDVKAGN
TKINDQTIML PPLSTQNINM KYASTSQYEV TIIDDNGNYI SSKINVK
|
|---|
| |