Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B2234 |
Symbol | gmd |
ID | 6792625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2150470 |
End bp | 2151591 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642776442 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_002147067 |
Protein GI | 197250836 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.712092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG TCGCTCTCAT TACTGGCGTA ACCGGACAGG ATGGGTCTTA CCTGGCAGAA TTTCTGCTGG AAAAAGGGTA TGAGGTGCAT GGTATCAAGC GCCGCGCGTC ATCGTTTAAT ACCGAGCGCG TGGACCATAT TTATCAGGAT CCGCACAGCT GCAACCCGAA ATTTCATCTG CATTATGGCG ACCTGACCGA CGCCTCCAAC CTGACCCGCA TTTTACAGGA AGTGCAGCCG GATGAGGTCT ACAACCTGGG CGCAATGAGC CACGTGGCGG TGTCGTTTGA GTCGCCGGAA TATACCGCCG ATGTGGATGC GATGGGCACG CTGCGCCTGC TGGAGGCGAT TCGCTTCCTC GGTCTTGAAA AGAAAACGCG GTTCTACCAG GCCTCCACCT CTGAACTGTA CGGTCTGGTG CAGGAAATTC CGCAGAAAGA GACCACGCCG TTCTACCCGC GTTCCCCCTA TGCGGTGGCG AAACTGTACG CCTACTGGAT CACCGTCAAC TACCGTGAAT CCTACGGCAT TTACGCCTGT AACGGCATTC TGTTTAACCA TGAGTCCCCG CGTCGTGGCG AAACCTTCGT CACCCGTAAG ATCACCCGCG CCATCGCCAA TATCGCCCAG GGACTGGAGT CCTGCCTGTA TCTCGGCAAC ATGGATTCGC TGCGCGACTG GGGCCATGCG AAAGATTACG TACGGATGCA GTGGATGATG TTACAGCAGG AGCAGCCGGA AGATTTCGTG ATTGCCACCG GCGTGCAGTA TTCCGTACGC CAGTTTGTGG AGCTGGCGGC GGCGCAACTG GGGATAAAAC TGCGCTTTGA AGGCGAAGGC ATTAATGAGA AAGGGATCGT GGTATCCGTT ACCGGACACG ATGCGCCGGG CGTGAAACCG GGGGATGTGA TTGTGGCCGT TGATCCGCGT TATTTCCGTC CGGCGGAAGT GGAAACCCTG CTGGGCGACC CGTCCAAAGC GCATGAGAAA CTGGGCTGGA AACCGGAAAT CACCCTGTCG GAGATGGTCT CCGAGATGGT GGCGAACGAT CTGGAGGCCG CGAAAAAACA CTCACTGCTG AAATCTCACG GTTACGAGGT GGCCATCGCG CTGGAGTCCT GA
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Protein sequence | MSKVALITGV TGQDGSYLAE FLLEKGYEVH GIKRRASSFN TERVDHIYQD PHSCNPKFHL HYGDLTDASN LTRILQEVQP DEVYNLGAMS HVAVSFESPE YTADVDAMGT LRLLEAIRFL GLEKKTRFYQ ASTSELYGLV QEIPQKETTP FYPRSPYAVA KLYAYWITVN YRESYGIYAC NGILFNHESP RRGETFVTRK ITRAIANIAQ GLESCLYLGN MDSLRDWGHA KDYVRMQWMM LQQEQPEDFV IATGVQYSVR QFVELAAAQL GIKLRFEGEG INEKGIVVSV TGHDAPGVKP GDVIVAVDPR YFRPAEVETL LGDPSKAHEK LGWKPEITLS EMVSEMVAND LEAAKKHSLL KSHGYEVAIA LES
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