Gene SeAg_B2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B2224 
SymbolwcaM 
ID6794715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp2137894 
End bp2139297 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content52% 
IMG OID642776432 
Productputative colanic acid biosynthesis protein 
Protein accessionYP_002147057 
Protein GI197250415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00496575 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCGA CTAAATTCTC CCGACGTACC CTCCTGACGG CAGGTTCTGC GCTTGCTGTT 
CTTCCTTTTC TGCGCGCCTT GCCGGTACAG GCGCGTGAAC CTCGCGAGAC CGTCGATATT 
AAGGATTATC CGGCGGATGA CGGTATCGCC TCGTTCAAAC AGGCCTTCGC CGACGGACAG 
ACCGTGGTCG TACCGCCAGG ATGGGTGTGT GAAAATATCA ATGCGGCGAT AACGATTCCG 
GCGGGAAAAA CGCTGCGGGT ACAGGGCGCG GTGCGTGGGA ATGGCCGGGG ACGGTTTATT 
TTGCAGGACG GGTGTCAGGT GGTGGGGGAG CAGGGCGGCA GTCTGCACAA TGTGACGCTG 
GATGTTCGCG GGTCGGACTG TGTGATTAAA GGCGTGACGA TGAGCGGCTT TGGCCCCGTC 
GCGCAAATTT TCATCGGCGG TAAGGAACCG CAGGTGATGC GTAATCTCAT TATCGATGAC 
ATCACCGTTA CCCACGCCAA CTACGCCATT CTCCGCCAGG GATTTCATAA CCAAATGGAC 
GGCGCGCGGA TTACGCATAG CCGCTTTAGC GATTTGCAGG GGGACGCCAT TGAGTGGAAT 
GTCGCGATTC ACGACCGCGA CATCCTGATT TCCGATCATG TCATCGAACG CATTGATTGT 
ACCAATGGCA AAATCAACTG GGGGATCGGC ATCGGGCTGG CGGGTAGTAC CTATGACAAC 
AGTTATCCTG AAGACCAGGC AGTAAAAAAC TTTGTGGTGG CCAATATTAC CGGATCTGAT 
TGCCGGCAGC TGGTGCACGT AGAAAATGGC AAACATTTCG TCATTCGCAA TGTGAAAGCC 
AAAAACATCA CGCCCGATTT CAGTAAAAAT GCGGGTATTG ATAACGCAAC GATCGCAATT 
TATGGCTGTG ATAATTTCGT CATTGATAAT ATTGATATGA CGAATAGTGC CGGGATGCTC 
ATCGGCTATG GCGTCGTTAA AGGAAAATAC CTGTCAATTC CGCAAAACTT TAAATTAAAC 
GCTATTCGGT TGGATAATCG CCAGGTTGCT TATAAATTAC GCGGCATTCA AATTTCCTCC 
GGCAACACCC CCTCTTTTGT CGCCATCACC AACGTACGGA TGACGCGTGC TACGCTGGAA 
CTGCATAATC AACCGCAGCA CCTCTTTTTG CGTAATATCA ACGTGATGCA AACTTCAGCG 
ATTGGCCCGG CGTTAAAAAT GCACTTCGAT TTGCGTAAAG ATGTCCGTGG TCAATTTATG 
GCCCGCCAGG ACACGCTGCT TTCCCTCGCT AATGTTCATG CCATCAATGA AAACGGGCAG 
AGTTCCGTGG ATATCGACAG GATTAATCAC CAAACCGTGA ATGTCGAAGC AGTGAATTTT 
CCGCTGCCGA AGCGGGGAGG GTAA
 
Protein sequence
MPATKFSRRT LLTAGSALAV LPFLRALPVQ AREPRETVDI KDYPADDGIA SFKQAFADGQ 
TVVVPPGWVC ENINAAITIP AGKTLRVQGA VRGNGRGRFI LQDGCQVVGE QGGSLHNVTL 
DVRGSDCVIK GVTMSGFGPV AQIFIGGKEP QVMRNLIIDD ITVTHANYAI LRQGFHNQMD 
GARITHSRFS DLQGDAIEWN VAIHDRDILI SDHVIERIDC TNGKINWGIG IGLAGSTYDN 
SYPEDQAVKN FVVANITGSD CRQLVHVENG KHFVIRNVKA KNITPDFSKN AGIDNATIAI 
YGCDNFVIDN IDMTNSAGML IGYGVVKGKY LSIPQNFKLN AIRLDNRQVA YKLRGIQISS 
GNTPSFVAIT NVRMTRATLE LHNQPQHLFL RNINVMQTSA IGPALKMHFD LRKDVRGQFM 
ARQDTLLSLA NVHAINENGQ SSVDIDRINH QTVNVEAVNF PLPKRGG