Gene SeAg_B2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B2219 
SymbolrfbC 
ID6794632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp2132984 
End bp2133532 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content40% 
IMG OID642776427 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002147052 
Protein GI197248407 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.107918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTGA TTAAAACAGC AATACCAGAT GTCTTGATCT TAGAGCCTAA AGTTTTTGGC 
GATGAGAGGG GATTCTTTTT TGAAAGTTAT AACCAGCAGA CCTTTGAAGA GTCTATTGGA 
CGTAAAGTTA CATTTGTTCA AGATAATCAT TCAAAATCCA AAAAGAACGT ACTCAGAGGG 
CTGCATTTTC AGAGAGGAGA AAATGCACAG GGTAAGTTAG TTCGTTGTGC TGTCGGTGAG 
GTTTTTGATG TTGCGGTCGA TATCCGAAAA GAGTCGCCTA CTTTTGGTCA GTGGGTTGGC 
GTAAATCTGT CTGCTGAGAA TAAGCGACAG CTTTGGATTC CAGAAGGTTT TGCTCATGGT 
TTTGTTACTC TTAGTGATTA TGCAGAATTT CTGTACAAAG CAACTAATTA TTACTCACCT 
TCATCAGAAG GTAGCATTCT ATGGAATGAT GAGGCAATAG GTATTGAATG GCCTTTTTCT 
CAGCTGCCTG AGCTTTCAGC AAAAGATGCT GCAGCACCTT TACTGCATCA AGCCTTGTTA 
ACAGAGTAA
 
Protein sequence
MIVIKTAIPD VLILEPKVFG DERGFFFESY NQQTFEESIG RKVTFVQDNH SKSKKNVLRG 
LHFQRGENAQ GKLVRCAVGE VFDVAVDIRK ESPTFGQWVG VNLSAENKRQ LWIPEGFAHG 
FVTLSDYAEF LYKATNYYSP SSEGSILWND EAIGIEWPFS QLPELSAKDA AAPLLHQALL 
TE