Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1963 |
Symbol | npdA |
ID | 6797234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1906546 |
End bp | 1907367 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642776189 |
Product | NAD-dependent deacetylase |
Protein accession | YP_002146820 |
Protein GI | 197248811 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.696827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGTCGC GTCGGTTTCA TCGATTAAGC CGCTTTCGTA AAAATAAACG TCTGTTGCGT GAACGTCTGC GCCAGCGGAT CTTTTTCAGA GACAGAGTGG TGCCGGAAAT GATGGAAAAC CCAAGAGTAT TAGTCCTTAC AGGTGCAGGA ATTTCTGCAG AGTCTGGTAT TCGTACGTTT CGCGCGGCGG ATGGCCTTTG GGAAGAGCAT CGGGTTGAAG ACGTGGCAAC GCCGGAAGGA TTCGCCCGTA ATCCGGGGCT GGTGCAGACA TTTTATAATG CCCGCCGTCA GCAGCTTCAA CAGCCGGAAA TACAACCCAA TGCGGCGCAT CTGGCGTTAG CGAAGCTTGA AGAAGCGCTT GGCGATCGCT TTTTGCTGGT GACGCAAAAC ATCGACAATT TGCATGAACG CGCGGGCAAC CGCAACATCA TTCATATGCA TGGCGAGCTG TTGAAGGTGC GCTGTTCGCA AAGCGGCCAA ATTCTGGAAT GGAACGGCGA TGTGATGCCG GAAGATAAAT GTCACTGCTG CCAGTTCCCG GCGCCGCTAC GTCCGCACGT GGTGTGGTTT GGCGAGATGC CGCTTGGCAT GGATGAAATT TATATGGCGC TGTCGATGGC GGATATTTTT ATCGCCATTG GCACATCCGG TCATGTCTAT CCGGCTGCGG GGTTTGTGCA TGAAGCAAAA CTGCACGGCG CGCATACGGT GGAACTGAAT CTTGAGCCAA GCCAGGTCGG CAGCGAGTTT GAAGAGAAGC ACTACGGCCC GGCAAGTCAG GTTGTGCCGG AATTTGTTGA TAAATTCCTG AAAGGGCTGT AG
|
Protein sequence | MQSRRFHRLS RFRKNKRLLR ERLRQRIFFR DRVVPEMMEN PRVLVLTGAG ISAESGIRTF RAADGLWEEH RVEDVATPEG FARNPGLVQT FYNARRQQLQ QPEIQPNAAH LALAKLEEAL GDRFLLVTQN IDNLHERAGN RNIIHMHGEL LKVRCSQSGQ ILEWNGDVMP EDKCHCCQFP APLRPHVVWF GEMPLGMDEI YMALSMADIF IAIGTSGHVY PAAGFVHEAK LHGAHTVELN LEPSQVGSEF EEKHYGPASQ VVPEFVDKFL KGL
|
| |