Gene SeAg_B1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1950 
SymbolmnmA 
ID6794438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1891447 
End bp1892553 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID642776176 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_002146807 
Protein GI197249278 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAA GCCCAAAAAA AGTGATCGTC GGCATGTCCG GCGGTGTCGA TTCCTCCGTT 
TCCGCCTGGC TGTTGCAACA ACAGGGTTAT CAGGTAGAAG GCCTGTTCAT GAAGAACTGG 
GAAGAGGACG ATGGTGAGGA ATACTGTACC GCGGCAGCCG ATCTGGCTGA CGCGCAGGCC 
GTGTGCGACA AACTTGGCAT TGAACTGCAT ACCGTTAATT TTGCCGCAGA ATATTGGGAT 
AACGTCTTTG AACTGTTCCT TGAAGAGTAC AAAGCGGGCC GTACGCCGAA CCCGGATATT 
CTGTGCAATA AAGAGATCAA ATTTAAAGCC TTCCTTGAAT TTGCCGCAGA AGATTTAGGC 
GCCGACTATA TCGCCACCGG TCACTACGTT CGCCGCGCGG ATGTAAACGG CAAAAGCCGG 
TTGTTGCGCG GGCTCGACGG CAACAAAGAT CAGAGCTACT TCCTCTATAC GCTTGGCCAT 
GAGCAGATTG CGCAAAGTCT GTTCCCGGTT GGCGAGCTGG AAAAACCGCA GGTGCGTAAA 
ATCGCCGAAG ATCTGGGGCT GGTAACCGCC AAGAAAAAAG ATTCTACCGG TATCTGCTTT 
ATCGGCGAGC GCAAATTCCG CGACTTTTTA GGGCGCTATC TGCCTGCGCA GCCGGGGAAA 
ATCATTACCG TTGACGGCGA TGAAATCGGC GAGCATCAGG GTCTGATGTA TCATACGCTC 
GGTCAGCGTA AAGGGCTGGG AATCGGCGGC ACCAAAGACG GTAGCGAAGA CCCCTGGTAT 
GTGGTGGATA AAGACGTTGA AAACAATGTG TTAATTGTCG CCCAAGGGCA TGAGCACCCA 
CGTCTGATGT CGGTAGGCCT CATCGCCCAG CAGCTACATT GGGTCGATCG CGAACCGTTC 
ACCGGCACCC TGCGCTGTAC GGTAAAAACC CGCTACCGCC AGACCGATAT TCCGTGCACG 
ATTAACGCGC TGGATGACGA TCGTATCGAG GTCATTTTTG ACGAGCCGGT TGCCGCCGTT 
ACGCCGGGCC AGTCCGCTGT CTTTTACAGC GGCGAAGTCT GCCTGGGTGG CGGCATTATC 
GAGCAGCGAC TGCCGCTGAC GGTCTGA
 
Protein sequence
MSESPKKVIV GMSGGVDSSV SAWLLQQQGY QVEGLFMKNW EEDDGEEYCT AAADLADAQA 
VCDKLGIELH TVNFAAEYWD NVFELFLEEY KAGRTPNPDI LCNKEIKFKA FLEFAAEDLG 
ADYIATGHYV RRADVNGKSR LLRGLDGNKD QSYFLYTLGH EQIAQSLFPV GELEKPQVRK 
IAEDLGLVTA KKKDSTGICF IGERKFRDFL GRYLPAQPGK IITVDGDEIG EHQGLMYHTL 
GQRKGLGIGG TKDGSEDPWY VVDKDVENNV LIVAQGHEHP RLMSVGLIAQ QLHWVDREPF 
TGTLRCTVKT RYRQTDIPCT INALDDDRIE VIFDEPVAAV TPGQSAVFYS GEVCLGGGII 
EQRLPLTV