Gene SeAg_B1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1888 
Symbol 
ID6793063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp1846858 
End bp1848054 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content50% 
IMG OID642776118 
Productchondroitin sulfate/heparin utilization regulation protein 
Protein accessionYP_002146752 
Protein GI197249407 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.422634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAG TATTCAATAC CGTAGCCAAG CCCAGCGGCA GTCTGTGTAA CTTATCCTGC 
AAGTACTGTT TCTATCTTGA TAAACCCCGG GGCCAGCGCG TCATGTCTGA CGATGTGCTG
GAGACGTATA TCCGCCGGGT AATTGATGAT ACGCCATCAT CAGAGGTCTC GTTTTGTTGG
CAGGGGGGAG AGCCGACGCT ATGCGGTCTT TCTTTTTACC AAAAAGTGGT GTGCTTGCAG
CAACGCTATG CCAACGGCAA AACTATTTAC AACAGTCTGC AAACCAATGG CGTATTAATC
AATGAAGAGT GGGCGGCTTT CTTTGCGCAG CACCAGTTCC TGATTGGTAT ATCGATTGAT
GGGCCGCAAG TCGTTCATGA TAATTACCGG AGAACGCCGT CAGGGCGGGC GTCTTTTTCC
CGAGTCGTGA ATGCTATCCG CCTTCTGCAG GCAAATGATG TCGAGTTCAA TACGCTCACT
GTCGTGAATG ATGCATCATG CCGTCATGGC AACGCTATTT ATCATTTTTT GACGCAGGAA
CTGGAAAGTA AACACCTGCA ATTTATTCCC ATTGTTGAGC CGCTCGCGCA AAAAGCGCAG
CGTTCTTTGA CGTTATCTGA CAATGAAGAT TCGCCTTCGC TGATGCCCTT TTCCGTCACG
CCTGAAGGGT GGGGCGCCTT TATGTGCGAT GTTTTTGATC AATGGATACG TCACGATGTC
GGACGCATAT TCGTACAGCT TTTTGACAAC TTACTTGGCG TCTGGATGGG GGAGCCCGCC
ACGCTTTGTA CGATGCAGTC GACCTGCGGG CAAAGTTTGC TGGTGGAGCA GAATGGCGAC
GTGTTTAGCT GCGACCATTT TGTTTTTCCC GCCTATAAAC TGGGCAATCT GCAGCAACAC
TCTTTAGAAG AAATGGCGGC CTCTCCTTTT CAGCAGCAGT TTGGCGCGGC TAAAGCAAAC
CTTTCCTCAC GCTGCCAGAA CTGTACGTGG CGCTTTGCCT GTCACGGCGG TTGTCCGAAA
CATCGAATTT GCATGGACGG CGGCGAACGG CAAAATTATC TCTGTAAAGG ATATCTGGAG
TTCTTTCAAC ATGTGACGCC CTATATGAAT GTGATGCGGC AATTATTACT GAATCAGCGA
CCCGCCGCGC ATATTACTCG CATCGTCGAC ATGATTGCGG ATGACGTTCG TCAGTGA
 
Protein sequence
MSIVFNTVAK PSGSLCNLSC KYCFYLDKPR GQRVMSDDVL ETYIRRVIDD TPSSEVSFCW 
QGGEPTLCGL SFYQKVVCLQ QRYANGKTIY NSLQTNGVLI NEEWAAFFAQ HQFLIGISID
GPQVVHDNYR RTPSGRASFS RVVNAIRLLQ ANDVEFNTLT VVNDASCRHG NAIYHFLTQE
LESKHLQFIP IVEPLAQKAQ RSLTLSDNED SPSLMPFSVT PEGWGAFMCD VFDQWIRHDV
GRIFVQLFDN LLGVWMGEPA TLCTMQSTCG QSLLVEQNGD VFSCDHFVFP AYKLGNLQQH
SLEEMAASPF QQQFGAAKAN LSSRCQNCTW RFACHGGCPK HRICMDGGER QNYLCKGYLE
FFQHVTPYMN VMRQLLLNQR PAAHITRIVD MIADDVRQ