Gene SeAg_B1880 details

Gene Information

• Locus tag: SeAg_B1880
• Symbol: sppA
• ID: 6792596
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 1838514
• End bp: 1840370
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642776110
• Product: protease 4
• Protein accession: YP_002146744
• Protein GI: 197250444
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0616] Periplasmic serine proteases (ClpP class)
• TIGRFAM ID: [TIGR00705] signal peptide peptidase SppA, 67K type; [TIGR00706] signal peptide peptidase SppA, 36K type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000366121
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAACCC TGTGGCGATT TATTGCCGGA TTTTTTAAAT GGACGTGGCG AGTGTTGAAC 
TTCGTCCGTG AAATGGTACT CAACCTGTTC TTTATTTTTC TGGTCCTGGT GGGCGTTGGG 
ATCTGGATGC AGATCGGTAA CGGCAGCAAC AGTGAGCAAA CGGCGCGCGG CGCTTTGCTG 
CTGGATATTT CCGGCGTCAT TGTGGATAAA CCCTCCACCA ATCACCGTCT GGGCGCGCTG 
GGACGCCAGT TATTTGGCGC CAGCTCCGAC CGTCTGCAGG AAAACTCCCT GTTTGACATC 
GTCAACGCTA TTCGTCAGGC GAAAGATGAC CGTAACATCA CTGGTATCGT TCTGGATCTG 
AAAAACTTCA CCGGTGCCGA TCAGCCGTCA ATGCGCTATA TCGGTAAAGC GCTGCGCGAA 
TTCCGCGACA GCGGCAAACC GGTTTTCGCC GTGGGTGAAA ACTACAGCCA GGGTCAGTAT 
TACCTCGCCA GTTTCGCCAA TAAAATTTGG CTTTCCCCAC AGGGTCAGGT AGACCTTCAC 
GGCTTCGCTA CGAATGGCCT GTACTACAAA ACGCTGCTGG ATAAACTGAA AGTCTCTACC 
CACGTTTTCC GGGTCGGCAC CTATAAATCC GCCGTCGAGC CGTTTATCCG CGACGATATG 
TCGCCCGCCG CCCGCGAGGC CGACAGCCGC TGGATAGGCG AACTGTGGCA GAACTACCTG 
CATACCGTTT CCGCCAATCG CCAGATTTCG CCGCAACAAC TCTTCCCCGG CGCGCAGGCT 
ATTATCGACG GGTTAACCAG CGTGGGCGGC GACACCGCCA AATATGCGCT CGACCATAAA 
CTGGTGGACG CCCTCGCCTC CAGCGCAGAT GTTGAAAAAG CGCTGACGAA GCAGTTTGGC 
TGGAGCAAAA CCGAAAATAA CTATCGCGCG ATCAGCTATT ACGATTATTC GCTGAAAACG 
CCTGCGGATA CCGGCGGTAC TATTGCGGTT ATTTTCGCCA ATGGCGCGAT TATGGATGGC 
GAAGAAACGC CAGGGAATGT CGGCGGCGAC ACTACGGCAT CGCAGATCCG CGACGCACGC 
CTTGATCCTA AAGTGAAAGC GATTGTGCTG CGCGTCAATA GCCCAGGCGG TAGCGTCAAC 
GCCTCCGAAG TTATCCGCGC CGAACTGGCG GCGGCAAGAG CGGCTGGCAA ACCGGTGGTG 
GTCTCAATGG GCGGTATGGC GGCCTCCGGC GGTTACTGGA TCTCTACGCC GGCAAACTAT 
ATCGTGGCCA GCCCCAGCAC GCTGACGGGT TCAATTGGCA TCTTCGGCGT CATCAATACG 
GTGGAAAACA GCCTGTCGTC GATTGGCGTA CACAGCGACG GCGTTTCCAC CTCGCCGCTG 
GCGGATATTT CGATGACCAA AGCGCTGTCA CCGGAAGTGC AGCAGATGAT GCAACTCAGT 
ATTGAGTACG GCTACAAACG CTTTATCACG CTGGTGGCAG ACGCGCGTAA GCGTACGCCG 
GAGCAGATTG ATAAAATCGC ACAAGGCCAT GTCTGGACCG GAGAAGACGC GAAAGCCAAT 
GGTCTGGTGG ACAGTCTTGG CGACTTTGAC GACGCCGTCG CCAAAGCGGC GGAGCTGGCG 
AAACTGAAAC AGTGGCATCT TGATTACTAT CAGGACGAAC CGACGGTCCT TGATATGGTC 
ATGGACAGTA TGACCGGATC AGTACGCGCC ATGCTGCCGG AGGCCATTCA GGCGATGCTC 
CCGGCGCCGC TCGTTTCCGC CGCCAACACG GTGAAGGCCG AGGGGGATAA ACTGGCGGCA 
TTTAACGATC CGCAAAACCG TTATGCGTTC TGTTTGACTT GCGCGAACGT TCGCTAA 

 

Protein sequence

MRTLWRFIAG FFKWTWRVLN FVREMVLNLF FIFLVLVGVG IWMQIGNGSN SEQTARGALL 
LDISGVIVDK PSTNHRLGAL GRQLFGASSD RLQENSLFDI VNAIRQAKDD RNITGIVLDL 
KNFTGADQPS MRYIGKALRE FRDSGKPVFA VGENYSQGQY YLASFANKIW LSPQGQVDLH 
GFATNGLYYK TLLDKLKVST HVFRVGTYKS AVEPFIRDDM SPAAREADSR WIGELWQNYL 
HTVSANRQIS PQQLFPGAQA IIDGLTSVGG DTAKYALDHK LVDALASSAD VEKALTKQFG 
WSKTENNYRA ISYYDYSLKT PADTGGTIAV IFANGAIMDG EETPGNVGGD TTASQIRDAR 
LDPKVKAIVL RVNSPGGSVN ASEVIRAELA AARAAGKPVV VSMGGMAASG GYWISTPANY 
IVASPSTLTG SIGIFGVINT VENSLSSIGV HSDGVSTSPL ADISMTKALS PEVQQMMQLS 
IEYGYKRFIT LVADARKRTP EQIDKIAQGH VWTGEDAKAN GLVDSLGDFD DAVAKAAELA 
KLKQWHLDYY QDEPTVLDMV MDSMTGSVRA MLPEAIQAML PAPLVSAANT VKAEGDKLAA 
FNDPQNRYAF CLTCANVR