Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1812 |
Symbol | |
ID | 6795268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1773395 |
End bp | 1774630 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642776043 |
Product | transporter, major facilitator family |
Protein accession | YP_002146677 |
Protein GI | 197248727 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTCAGA ACAAGGCTCG CAACATGCCA TATTTGCTGG CTGTTATCTG CATTTATTTT AGTTACTTTC TCCACGGCAT GAGTGTTATT ACACTAGCCC AGAACATGAC CTCCCTTGCA CAGAAATTCT CCACGGATAG TGCCGGTATT GCCTATTTAA TCTCTGGCAT TGGTCTTGGT CGTCTGGTCA GTATTTTATT CTTTGGCGTA CTGTCCGATA AATTTGGCCG TCGGGCAATA ATACTGCTTG GCGCCGTACT ATATATGCTG TTTTTCTTCG GTATTCCCGC CAGTCCTAAC CTGATGATCG CTTTCATATT AGCGGTGTGT GTCGGCGTGG CGAACTCCGC GCTGGATACC GGCGGATACC CTGCATTAAT GGAGTGTTTT CCCAAAGCAT CGGGCTCGGC AGTTATTCTG GTTAAAGCGA TGGTCTCTTT TGGGCAAATG ATTTACCCCC TTATCGTCAG CGCCTTGTTA GTCAACCATA TCTGGTACGG CTACGCGGTG GTAATCCCCG GTATCCTTTT CGTCCTCATC ACGTTGATGC TGTTGAAAAG CCGTTTTCCC AGCCAACTTG TCGATGCCAG TATTGCGAAA GAATTACCCC AGATGAACAG TACTCCCCTC GTCTGGCTGG AAGGCGTAGC TTCCGTTTTA TTTGGCGTCG CCGCGTTCTC AACCTTCTAT GTGATTGTGG TCTGGATGCC TAAATATGCG ATGGCCTTCG CCGGAATGGC GGAATCCGAC GCGCTGAAAA CCATCTCTTA TTACAGTATG GGATCGTTGG TTTGCGTGTT TATTTTTGCC GCATTGCTGA AAAAAATGGT TCGCCCTATC TGGGCCAATG TTTTCAATGC CGGGCTGGCG ACACTCACCG CTGCGGCAAT TTACCTGTAT CCCTCTCCAC TGATCTGTAA TGCTGGCGCC TTCGTGATTG GTTTTTCCGC TGCTGGAGGT ATTTTACAAT TAGGTGTATC GGTAATGTCG GAATTTTTCC CTAAGAGTAA AGCTAAAGTC ACCAGTATAT ATATGATGAT GGGGGGCGTA GCTAACTTTA TTATTCCACT GATCACCGGT TATCTCTCTA CTATTGGCCT GCAATATATC ATTTTGTTAG ATTTTGCCTT TGCACTACTG ACATTTATCA CCGCCATTAT TGTATTTATT CGCTATTATC GCGTATTTAA GATCCCGCAA AACGATGTCC GATTTGGCGA GCGTTATTTC CAGTAA
|
Protein sequence | MSQNKARNMP YLLAVICIYF SYFLHGMSVI TLAQNMTSLA QKFSTDSAGI AYLISGIGLG RLVSILFFGV LSDKFGRRAI ILLGAVLYML FFFGIPASPN LMIAFILAVC VGVANSALDT GGYPALMECF PKASGSAVIL VKAMVSFGQM IYPLIVSALL VNHIWYGYAV VIPGILFVLI TLMLLKSRFP SQLVDASIAK ELPQMNSTPL VWLEGVASVL FGVAAFSTFY VIVVWMPKYA MAFAGMAESD ALKTISYYSM GSLVCVFIFA ALLKKMVRPI WANVFNAGLA TLTAAAIYLY PSPLICNAGA FVIGFSAAGG ILQLGVSVMS EFFPKSKAKV TSIYMMMGGV ANFIIPLITG YLSTIGLQYI ILLDFAFALL TFITAIIVFI RYYRVFKIPQ NDVRFGERYF Q
|
| |