Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1811 |
Symbol | |
ID | 6796082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1771820 |
End bp | 1773031 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642776042 |
Product | inner membrane transport protein YdiM |
Protein accession | YP_002146676 |
Protein GI | 197249267 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATC GTTATTTCCC TACCGCTGTA GGGTTGTATT TTAATTACTT TGTACATGGC ATGGGGGTTA TCCTGATGAG CCTGAACATG TCATCGCTTG AACAGCAATG GCATACCAGT GCCGCAGGCG TATCTATTGT GATCTCTTCG CTTGGGATTG GCCGGCTAAG CGTTTTGTTA ATCGCCGGTA TGCTTTCCGA TCGCTTTGGT CGCCGTCCTT TTATCATTCT GGGGACCGCC TGTTACCTAA TTTTTTTCAT TGGCATTCTT TATGCTCAGA CGATTTTTGT CGCTTATGCC TGTGGCTTTT TAGCGGGTAT GGCCAACAGT TTTTTAGATG CAGGTACCTA TCCCAGTTTG ATGGAAGCCT TCCCTCGCTC CCCCAGTACG GCAAATATTC TGATCAAAGC ATTTGTCTCT GGCGGGCAAT TCTTGTTGCC CATTATTATC AGTTTATTAG TCTGGGCTAA TATGTGGTTT GGCTGGTCCT TCCTGCTTGC CGGGGCGATC ATGCTTATTA ATGCTCTGTT TTTATTACGC TGCCCTTTTC CACCCTATCC TGGTCGGATA TTGAAACCCA AAATCTCGCA AGCGCCTGTT GCAGGCGTAC ATCATTGCTC CCTCATCGAT CTGATCAGCT ACACCCTTTA TGGCTATATC TCGATGGCAA CCTTTTACCT TATCAGCCAG TGGCTGGCGC AGTATGGACA GTTCGTCGCA GGAATGTCGT ATACCCAATC CATCAAACTG TTAAGTATTT ATACCTGCGG ATCGCTACTG TGCGTTTTTA TTACTGCCCC GCTGGTCAGA AAAACAATTC GCTCTACCAC ATTATTGATG TTTTATACCT TTATCTCTTT TATTGCGCTT CTGACGGTCT GCCTGCATCC TCAGGTCTAT GTTGTTATGA TCTTCGCATT CGTCATTGGA TTCTCTTCCG CCGGTGGCGT AGTACAAATC GGCCTGACGC TGATGGCGGC CCGTTTTCCA CAGGAGAAAG GTAAAGCGAC CGGCATTTAT TACAGCGCCG GCAGTATCGC GACGTTCACT ATTCCGTTGA TCACAGCGCG GATTTCAGAA ATGAGCATTG CACATATTAT GTGGTTTGAT ACCGGTATCG CCGCAGCGGG ATTTCTCCTC GCACTGTTCA TCGGTTACCG AAGTCGGGCT GAATCACAAC ATCACGCTGA AGCAGCGTCA ACTGCGCAAT AA
|
Protein sequence | MKNRYFPTAV GLYFNYFVHG MGVILMSLNM SSLEQQWHTS AAGVSIVISS LGIGRLSVLL IAGMLSDRFG RRPFIILGTA CYLIFFIGIL YAQTIFVAYA CGFLAGMANS FLDAGTYPSL MEAFPRSPST ANILIKAFVS GGQFLLPIII SLLVWANMWF GWSFLLAGAI MLINALFLLR CPFPPYPGRI LKPKISQAPV AGVHHCSLID LISYTLYGYI SMATFYLISQ WLAQYGQFVA GMSYTQSIKL LSIYTCGSLL CVFITAPLVR KTIRSTTLLM FYTFISFIAL LTVCLHPQVY VVMIFAFVIG FSSAGGVVQI GLTLMAARFP QEKGKATGIY YSAGSIATFT IPLITARISE MSIAHIMWFD TGIAAAGFLL ALFIGYRSRA ESQHHAEAAS TAQ
|
| |