Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1746 |
Symbol | |
ID | 6794159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1709106 |
End bp | 1710311 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642775981 |
Product | inner membrane transport protein YdhC |
Protein accession | YP_002146617 |
Protein GI | 197248118 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000953992 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCTG GAAAAGGTTT TTTAGTCTGG TTAGCCGGTC TTAGCGTGCT GGGATTTCTG GCTACGGACA TGTACCTGCC CGCGTTTGCC GCCATACAGG CGGATTTACA AACGCCTGCC GCCGCTGTCA GCGCCAGCCT CAGCCTGTTT TTAGCTGGCT TTGCCGTCGC GCAACTACTT TGGGGACCGC TATCGGATCG TTATGGCCGT AAACCGATTT TACTGCTGGG GTTATCTATC TTTGCGCTCG GAAGTCTGGG GATGCTGTGG GTAGAAAGCG CGGCAGCACT GCTGACGCTG CGCTTTGTGC AGGCCGTCGG CGTTTGTGCG GCAACGGTAA TCTGGCAAGC GCTGGTGACC GATTATTATC CTTCGCAAAA AATTAACCGT ATCTTCGCCA CTATCATGCC ACTGGTGGGA TTATCCCCGG CGCTTGCGCC CTTACTGGGA AGCTGGATAC TGACGCATTT CTCATGGCAG GCGATTTTCG CCACCCTGTT CGTGATTACG TTGTTGCTGA TGTTGCCGGC GCTGCGCTTA AAACCATCGG TAAAAGCGCG TACCGAGGGA CAGGATAAAC TCACTTTCGC GACGTTGTTA CGCTCTAAAA CCTATCGCGG TAATGTGCTG ATTTATGCCG CCTGTTCCGC CAGCTTTTTT GCGTGGCTAA CAGGGTCGCC GTTTATTCTC AGCGCGATGG GTTACAGCCC GGCAGTGATT GGCCTGAGCT ATGTTCCGCA AACCATCGCT TTTCTGATTG GCGGATATGG TTGCCGCGCG GCGCTACAAA AATGGCAGGG CTACCAATTG CTTCCGTGGC TGTTAGGGCT GTACGCGCTG AGCGTTATCG CCACCTGGGG AGCGGGCCTT CTGAATAATA CCTCACTGGT GGAGATCCTG ATTCCTTTCT GCGTAATGGC GATTGCTAAT GGCGCAATTT ACCCTATCGT CGTCGCGCAA GCGTTACGCC CTTTCCCTCA AGCCACGGGG CGCGCTGCGG CGCTACAAAA TACGCTGCAG CTGGGGTTAT GTTTCCTGGC AAGCCTGGTG GTTTCATGGC TCATCAGCAC GCCGCTGCTG ACCACCACCA GCGTAATGCT CTCTACCGTT GTTCTGGCGG CGTTAGGCTA CAAAATGCAG TCTCATGCAG ATTGCGCTGA GACCGGGTTT CCCCATGCCA ATGTCGCCCA CGACAAGTCT CACTAA
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Protein sequence | MQPGKGFLVW LAGLSVLGFL ATDMYLPAFA AIQADLQTPA AAVSASLSLF LAGFAVAQLL WGPLSDRYGR KPILLLGLSI FALGSLGMLW VESAAALLTL RFVQAVGVCA ATVIWQALVT DYYPSQKINR IFATIMPLVG LSPALAPLLG SWILTHFSWQ AIFATLFVIT LLLMLPALRL KPSVKARTEG QDKLTFATLL RSKTYRGNVL IYAACSASFF AWLTGSPFIL SAMGYSPAVI GLSYVPQTIA FLIGGYGCRA ALQKWQGYQL LPWLLGLYAL SVIATWGAGL LNNTSLVEIL IPFCVMAIAN GAIYPIVVAQ ALRPFPQATG RAAALQNTLQ LGLCFLASLV VSWLISTPLL TTTSVMLSTV VLAALGYKMQ SHADCAETGF PHANVAHDKS H
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