Gene SeAg_B1740 details

Gene Information

• Locus tag: SeAg_B1740
• Symbol: rnt
• ID: 6795741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 1703636
• End bp: 1704283
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642775975
• Product: ribonuclease T
• Protein accession: YP_002146611
• Protein GI: 197251543
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
• TIGRFAM ID: [TIGR01298] ribonuclease T

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00194443
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGATA ACGCTCAACT TTCCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTC 
GTCATCGACG TTGAAACTGC AGGATTTAAC GCTAAAACCG ATGCGCTGCT CGAAATCGCC 
GCCATCACGC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACATGAC GCTGCATTTC 
CATGTGGAGC CATTCGCTGG AGCCAACTTA CAGCCGGAAG CGCTCGCGTT TAACGGTATC 
GATCCCTCTA ACCCGCTACG CGGCGCGGTG AGTGAATATG AGGCGCTACA CGCTATTTTC 
AAAATGGTGC GTAAAGGTAT CAAAGACAGC GGTTGTAGCC GCGCCATTAT GGTCGCGCAT 
AACGCCACTT TTGATCACAG TTTTATGATG GCCGCCGCAG AGCGCGCCTC GCTGAAACGT 
AACCCGTTTC ATCCGTTCGT CACCTTTGAT ACTGCGGCAT TGAGCGGACT GGCGCTGGGA 
CAAACGGTGT TATCAAAAGC GTGCCTGGCG GCAGGTATGG AGTTTGACGG CGAAAAGGCC 
CATTCCGCTT TGTATGATAC CGAGCGGACA GCGGTGCTGT TTTGTGAAAT CGTCAATCGC 
TGGAAGCGCC TGGGCGGCTG GCCGTTACCT TTGCCGACGG ACAAATAA 

 

Protein sequence

MSDNAQLSGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDMTLHF 
HVEPFAGANL QPEALAFNGI DPSNPLRGAV SEYEALHAIF KMVRKGIKDS GCSRAIMVAH 
NATFDHSFMM AAAERASLKR NPFHPFVTFD TAALSGLALG QTVLSKACLA AGMEFDGEKA 
HSALYDTERT AVLFCEIVNR WKRLGGWPLP LPTDK