Gene SeAg_B1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1718 
SymbolrnfD 
ID6796189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp1684415 
End bp1685473 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content57% 
IMG OID642775953 
Productelectron transport complex protein RnfD 
Protein accessionYP_002146589 
Protein GI197249196 
COG category[C] Energy production and conversion 
COG ID[COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 
TIGRFAM ID[TIGR01946] electron transport complex, RnfABCDGE type, D subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.447234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTCA GAATCGCAAG CTCGCCTTAT ACCCATAACC AGCGCCAGAC ATCGCGAATC 
ATGTTGCTGG TAGTAATCGC CGCTCTGCCG GGGATTGCCG CGCAGACGTG GTTTTTTGGT
TGGGGAACGC TTTTCCAGAT CGTTCTGGCA GCCATCACAG CGCTCGTCGC GGAAGCCATT
GTCCTCAGGC TGCGCAAACA ATCGGTCGCC AGTCACCTGC AGGATTATTC CGCGTTGTTG
ACGGGGCTTT TGCTGGCGGT CAGCATCCCT CCGCTCGCGC CCTGGTGGAT GGTCGTACTG
GGAACCGGAT TCGCCATTAT TATCGCTAAA CAGTTATATG GCGGGCTGGG ACAAAACCCC
TTTAATCCGG CCATGATCGG CTACGTGGTG CTATTAATTT CCTTTCCGGT GCAAATGACA
AGCTGGTTGC CGCCTTATGA AATAGCCGCA ACAACGCCCG ATATGCTGGA CACGTTGCGG
ATGATTTTTA CCGGGCATAC CGCCAGCGGC GGCGATATGA CGCTGCTACG TATCGGTATT
GACGGTATCA GCCAGGCGAC GCCGCTGGAT ACGTTTAAAA CGTCCTTGCG CGCCGGGCAC
TCCGTTGAGC AAATCATGCA GTACCCGATA TACAGCGGCG CGCTGGCTGG CGTGGGCTGG
CAGTGGGTTA ACCTCGCCTG GCTTGTCGGC GGCGTATTCC TGCTGTGGCA AAAAGCCATC
CGCTGGCATA TCCCGGTCAG TTTTCTGCTG ACGCTGGCGC TATGCGCCGC GTTAGGTTGG
CTTTTCTCGC CCGCTACGCT GGCCTCGCCG CAGCTTCATC TGCTGTCAGG CGCCACCATG
CTGGGCGCAT TTTTTATCTT GACGGATCCG GTTACCGCCT CCACGACCAA CCGTGGACGT
TTAATTTTCG GCGCGCTGGC TGGGGTATTA GTGTGGCTGA TTCGTAGCTT CGGCGGCTAT
CCGGACGGCG TTGCTTTTGC TGTCCTGTTG GCGAATATCA CGGTTCCTCT GATCGACTAC
TACACGCGCC CCCGCGTCTA TGGACATCGC AAAGGATAA
 
Protein sequence
MVFRIASSPY THNQRQTSRI MLLVVIAALP GIAAQTWFFG WGTLFQIVLA AITALVAEAI 
VLRLRKQSVA SHLQDYSALL TGLLLAVSIP PLAPWWMVVL GTGFAIIIAK QLYGGLGQNP
FNPAMIGYVV LLISFPVQMT SWLPPYEIAA TTPDMLDTLR MIFTGHTASG GDMTLLRIGI
DGISQATPLD TFKTSLRAGH SVEQIMQYPI YSGALAGVGW QWVNLAWLVG GVFLLWQKAI
RWHIPVSFLL TLALCAALGW LFSPATLASP QLHLLSGATM LGAFFILTDP VTASTTNRGR
LIFGALAGVL VWLIRSFGGY PDGVAFAVLL ANITVPLIDY YTRPRVYGHR KG