Gene SeAg_B1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1706 
Symbol 
ID6792799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp1671585 
End bp1673231 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content55% 
IMG OID642775941 
Productfumarate hydratase class I, anaerobic 
Protein accessionYP_002146577 
Protein GI197251012 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.142614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACA AACCCTTCTT TTATCAAGAC CCTTTTCCCC TCAAAAAGGA CGATACCGAG 
TACTACTTGT TGACCAGCGA ACATGTTTCC GTCGCCGAAT TTGAAGGACA AGAGATCCTG 
AAAGTCGCGC CGGAAGCGCT AACGCTGTTG GCGCGTCAGG CCTTCCACGA TGCGTCTTTT 
ATGTTACGTC CCGCGCATCA GCAGCAGGTG GCGGATATTC TGCGCGATCC GCAGGCCAGT 
GAAAACGACA AATATGTCGC GCTGCAATTC CTGCGAAACT CCGATATTGC GGCCAAGGGC 
GTGTTGCCCA CCTGCCAGGA TACCGGTACG GCCATTATTG TCGGCAAAAA AGGCCAACGC 
GTCTGGACTG GCGGAGGTGA TGAAGCGGCG CTGGCTCGCG GCGTATATAA CACCTATATC 
GAAGATAACC TGCGCTATTC GCAAAACGCG GCGCTGGATA TGTACAAAGA GGTCAATACC 
GGTACTAATC TGCCGGCGCA GATCGATCTC TACAGCGTCG ATGGCGATGA ATATAAATTC 
CTCTGTATCG CTAAAGGCGG CGGATCGGCG AATAAAACCT ACCTCTATCA GGAGACAAAA 
GCGCTTCTGA CGCCGGGTAA GCTCAAAAAT TATCTCGTTG ATAAGATGCG TACGCTGGGC 
ACCGCCGCTT GTCCGCCGTA TCACATCGCG TTTGTCATTG GCGGCACCTC GGCGGAAGCG 
AACCTGAAGA CCGTTAAGCT GGCCTCGGCA AAATACTATG ATGCGCTACC GACCGAAGGC 
AATGAACACG GGCAGGCCTT CCGCGATATT GAGCTGGAAA AAGAATTGTT GTTTGAGGCG 
CAAAATCTTG GCTTAGGCGC GCAGTTCGGC GGCAAATATT TCGCTCACGA TATTCGTGTC 
ATCCGATTGC CGCGCCACGG GGCATCGTGT CCGGTAGGTA TGGGCGTGTC CTGCTCCGCG 
GATCGAAACA TTAAAGCGAA GATCAACCGG GACGGGATCT GGATCGAGAA GCTGGAGCGC 
AATCCCGGTA AATATATTCC TGAGGCGTTG CGCCAGGCGG GAGAGGGCGA GGCGGTGCGC 
GTTGATCTTA ACCGTCCCAT GAGCGAGATA CTGCAACAAC TGTCGCAGTA TCCGGTATCA 
ACGCGCCTGT CGCTGAACGG CACGATTATT GTGGGCCGCG ACATCGCGCA CGCTAAACTG 
AAAGAACGGA TGGACAGAGG CGAAGGTTTG CCGCAGTACA TCAAAGATCA TCCTATCTAT 
TATGCGGGGC CGGCAAAAAC GCCGGAAGGG TACGCCTCCG GGTCGCTTGG GCCGACTACC 
GCAGGACGGA TGGACTCTTA TGTTGATCAG CTCCAGTCGC AGGGCGGCAG TATGATCATG 
CTGGCGAAAG GCAACCGCAG CCAGCAGGTG ACCGATGCCT GTAAGAAACA TGGCGGCTTC 
TACCTGGGCA GTATCGGCGG CCCGGCAGCC GTTCTGGCGC AGGGTAGTAT CAAGCGCCTG 
GAGTGCGTGG AATATCCTGA ACTGGGTATG GAGGCTATCT GGAAAATTGA AGTGGAGGAT 
TTTCCGGCCT TCATTCTGGT GGATGATAAA GGTAACGATT TCTTCCAGCA GATTCAGTCA 
TCGCAGTGCG CGCGCTGCGT TAAGTAA
 
Protein sequence
MSNKPFFYQD PFPLKKDDTE YYLLTSEHVS VAEFEGQEIL KVAPEALTLL ARQAFHDASF 
MLRPAHQQQV ADILRDPQAS ENDKYVALQF LRNSDIAAKG VLPTCQDTGT AIIVGKKGQR 
VWTGGGDEAA LARGVYNTYI EDNLRYSQNA ALDMYKEVNT GTNLPAQIDL YSVDGDEYKF 
LCIAKGGGSA NKTYLYQETK ALLTPGKLKN YLVDKMRTLG TAACPPYHIA FVIGGTSAEA 
NLKTVKLASA KYYDALPTEG NEHGQAFRDI ELEKELLFEA QNLGLGAQFG GKYFAHDIRV 
IRLPRHGASC PVGMGVSCSA DRNIKAKINR DGIWIEKLER NPGKYIPEAL RQAGEGEAVR 
VDLNRPMSEI LQQLSQYPVS TRLSLNGTII VGRDIAHAKL KERMDRGEGL PQYIKDHPIY 
YAGPAKTPEG YASGSLGPTT AGRMDSYVDQ LQSQGGSMIM LAKGNRSQQV TDACKKHGGF 
YLGSIGGPAA VLAQGSIKRL ECVEYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIQS 
SQCARCVK