| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1702 |
|---|
| Symbol | |
|---|
| ID | 6795822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 1665900 |
|---|
| End bp | 1667600 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642775937 |
|---|
| Product | putative amidohydrolase family |
|---|
| Protein accession | YP_002146573 |
|---|
| Protein GI | 197251369 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0262541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGTC TCGTCCCGCC TCTGCTTTCC AGAACCGCGC TTCTCTTTCT GCTCATGGCC
ACAGGCGCAG CCACCGCCGC CCGCCCGGCA GCGGATATTA TTTTGCATAA CGGTAATATC
ATCACTCTGA ATGATGCCCA GCCGCAGGCC AGCGCGCTGG CGATTTCCGG CTCGCGGATT
GTGGCGATTG GCGATGATAC GGCGACAAAT GAATGGCGCG GCGACCATAC CCGTACCATC
GATTTACAGG GTAAAACCGT GATACCCGGC CTGACCGATA CCCATATCCA CGCCATTCGC
GGCGGACAAA CCTGGACATT CGAAACCTAC TGGTACGACA GCCCTTCGCT TAAAGACGCG
CTGGATAAAT TACGCGCCGA CGCTAACCGT CGTCCCCACG ATCAATGGGT AGCCGTAGTG
GGATCGTGGA TACCGGCGCA ATTTGCAGAA AACCGGGCGC CGACGGTAGC CGAATTGAGC
CACGCCCTTC CCGATCATCC GGCTTATATT CAGTATCTGT ACGACTATGC GTTAGTGAAT
CAGCGCGGTA TAGACGTACT TGGCCTTAAC GACACCCCTC CTCCTGATTT AGCGGGAATC
CGCGTAGAGC GCGACGCAAA AGGTAGCGCC ACGGGGAAAT TATTTGCTGA CATCGCCGCG
TTCAATCAGC TTTTTGCCAG CATAAGTAGT AACGCCGATC GTGAGGGTGG TCTGCGGCAA
TTTTTCGCTG ATATGAACGC TCGCGGCGTG ACCGGCATCA TTGACCCCTC TGCCGGGCCT
GCCGCCGCTT ATGAGCCTTT ATTTGCAATG CGAAACCAGG GGGATTTACC GCTGCGCGTG
GGGTATCGCA TTCCGGTACA GCCAGAAGCG AAAGGTCATG AAGCGCAGTG GTTCAGCAAC
CTGATGGCCT TTCGCCCGGC GCGTGCCGAT GACGGGCAAC TGGCTTTTCT TGGCCTGGGG
GAAAGCCTGG TGGCCGGAAT GAATGACGGC GTGCGGATGG CCCCAGGGTT TTCTTCCTCA
GAACAGGACA AAACCGCGCT TCGCCAGGTC GCGACGTTTG CGGCAAAACG GGGAATACCG
CTTGAGATCC ACGCCTATAC CGATGACAGC GCCGACGCGA TATTGACGAT TTTTGAGCAG
GTAGCGCAGC AGTACGATCT GCGCCCTCTC CGCTGGTCTA TTGCGCACCT GAATACCGGT
TCGCCACAGA CGCTTGAGCG AATGCGTAAG CTGGGTCTGG CATACACTGT GCAAATGGGG
CCTTACTTTG AGGGGCTTGC CATCCGTGAC GCCAATCCAC CCGGCGCGAC GGACAATTCG
CCGCCGGTTC GACTGGCGCT GGATAAAGGG CTTGTCGTGG CTGGCGGCAC CGATTCGACG
CGTATTGGCA TTGCCGGTGT CTGGCACGCT ATCGAATATC ATATCACCGG TATAGCGTCA
GGCGGTTCCG TGCGTAAACC CGCCAGCGAG CGGCTCACGC GTCTGGAAGC GCTAGCGTTA
TATACACGTC ATGCCGCCTG GCTCGCCTTT GCCGAACAAC ACCGGGGCCA GCTTAGCGTC
GGAAAACAGG CCGATCTGGC GGTACTCAAT CAGCCATTTA TGACGATGCC CGAAGACAGA
ATTGATACCA TTCGCGCTGT TTTGACGCTT GTCGATGGAC GCATTGTTCA CGAAAGTCCG
GACCTTAACG CCGGACAATG A
|
|---|
| Protein sequence | MISLVPPLLS RTALLFLLMA TGAATAARPA ADIILHNGNI ITLNDAQPQA SALAISGSRI
VAIGDDTATN EWRGDHTRTI DLQGKTVIPG LTDTHIHAIR GGQTWTFETY WYDSPSLKDA
LDKLRADANR RPHDQWVAVV GSWIPAQFAE NRAPTVAELS HALPDHPAYI QYLYDYALVN
QRGIDVLGLN DTPPPDLAGI RVERDAKGSA TGKLFADIAA FNQLFASISS NADREGGLRQ
FFADMNARGV TGIIDPSAGP AAAYEPLFAM RNQGDLPLRV GYRIPVQPEA KGHEAQWFSN
LMAFRPARAD DGQLAFLGLG ESLVAGMNDG VRMAPGFSSS EQDKTALRQV ATFAAKRGIP
LEIHAYTDDS ADAILTIFEQ VAQQYDLRPL RWSIAHLNTG SPQTLERMRK LGLAYTVQMG
PYFEGLAIRD ANPPGATDNS PPVRLALDKG LVVAGGTDST RIGIAGVWHA IEYHITGIAS
GGSVRKPASE RLTRLEALAL YTRHAAWLAF AEQHRGQLSV GKQADLAVLN QPFMTMPEDR
IDTIRAVLTL VDGRIVHESP DLNAGQ
|
|---|
| |