Gene SeAg_B1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1686 
Symbol 
ID6797199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp1651434 
End bp1652687 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content55% 
IMG OID642775921 
Productinner membrane transport protein YnfM 
Protein accessionYP_002146557 
Protein GI197251085 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCGTA CAACTATTCT CGATGACGCC ACGGCGAGCG ATATCGATGA ACAATGCCAT 
TCTCAGCCGG TTCAATTTAT TAAACGCGGT ACAGCGCCTT TCATGCGCGT CACGCTGGCC
CTTTTTTCCG CGGGCCTGGC GACTTTCGCG CTCCTTTATT GCATTCAGCC TATACTACCG
GTACTTTCCC AGGAGTTTGG CGTCTCCCCC GCCAGCAGCA GCGTTTCACT TTCTATTTCT
ACCGCCATGC TGGCTATCGG CTTACTTTTT ACCGGCCCGC TTTCTGATGC GATAGGCCGT
AAACCGGTGA TGGTCACCGC CTTGTTATTA GCCTCCTGCT GCACATTGTT ATCAACCATG
ATGACCAGCT GGCATGGTAT TCTGATTATG CGTGCGCTGA TCGGTCTGTC GTTAAGCGGC
GTCGCCGCGG TGGGAATGAC CTACCTGAGC GAAGAAATCC ATCCCAGCTT TGTCGCTTTC
TCCATGGGGC TCTATATTAG CGGTAATTCC ATCGGCGGGA TGAGCGGGCG TTTATTAAGC
GGCGTCATGA CCGACTTTTT TAACTGGCGC ATCGCGCTGG CGGCCATCGG ATGCTTTGCG
CTGGCGTCCG CGCTGATGTT CTGGAAGATT TTACCCGCCT CGCAACATTT CCGTCCCACG
TCGCTACGGC CTAAAACGCT ATTTATTAAT TTCCGTCTCC ACTGGCGCGA TCGGGGGTTA
CCTCTGCTGT TTGCAGAAGG TTTTTTACTG ATGGGCGCGT TCGTCACCCT GTTTAACTAC
ATTGGTTATC GCCTGATGCT CTCCCCCTGG GAATTAAGCC AGGCCGTGGT CGGACTGTTA
TCCGTAGCCT ATCTCACCGG CACGTGGAGC TCGCCGAAAG CTGGCGCAAT GACCTCACGC
TATGGCCGGG GGCCGGTGAT GCTGTTCTCT ATCGCAGTAA TGCTGGGCGG GCTTTTACTG
ACGCTTTTTA CCTCGCTTTG GCTGATTTTT GCCGGGATGC TGCTTTTTTC CGCCGGCTTT
TTCGCCGCGC ACTCCGTGGC CAGTAGTTGG ATTGGCCCGC GTGCGCGCCG GGCGAAGGGA
CAGGCCTCGT CACTTTATCT TTTCAGCTAT TATCTGGGGT CCAGTATCGC CGGGACGCTA
GGCGGCGTAT TCTGGCATAG TTACGGCTGG AACGGCGTAG GCGGTTTTAT CGCGCTAATG
CTGGTGCTGG CCATCATGGT CGGGACGCGG TTACATCATC GTCTTCACGC CTGA
 
Protein sequence
MSRTTILDDA TASDIDEQCH SQPVQFIKRG TAPFMRVTLA LFSAGLATFA LLYCIQPILP 
VLSQEFGVSP ASSSVSLSIS TAMLAIGLLF TGPLSDAIGR KPVMVTALLL ASCCTLLSTM
MTSWHGILIM RALIGLSLSG VAAVGMTYLS EEIHPSFVAF SMGLYISGNS IGGMSGRLLS
GVMTDFFNWR IALAAIGCFA LASALMFWKI LPASQHFRPT SLRPKTLFIN FRLHWRDRGL
PLLFAEGFLL MGAFVTLFNY IGYRLMLSPW ELSQAVVGLL SVAYLTGTWS SPKAGAMTSR
YGRGPVMLFS IAVMLGGLLL TLFTSLWLIF AGMLLFSAGF FAAHSVASSW IGPRARRAKG
QASSLYLFSY YLGSSIAGTL GGVFWHSYGW NGVGGFIALM LVLAIMVGTR LHHRLHA