Gene SeAg_B1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1681 
Symbol 
ID6794096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1645717 
End bp1646865 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content53% 
IMG OID642775916 
Productcholine transport ATP-binding protein opuBA 
Protein accessionYP_002146552 
Protein GI197251148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.413883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAC TGGAAAATCT CACCAAACAA TTTGTACAGA AAAAGGGTCA GCCGCTAAAA 
GCCGTCGACA ACGTCAACCT GAACGTGCCG GAAGGCGAAA TGTGCGTCTT ACTCGGTCCC 
TCCGGCTGCG GCAAAACCAC CACGTTAAAG ATGATCAACC GGCTGATCGC GCCCAGCAGC 
GGTAATATTC TTATCAACGG CGAGAATACC AACGATATGG ATACGGTAAC GCTACGCCGC 
AATATTGGGT ATGTTATCCA ACAAATCGGC CTGTTTCCTA ATATGACGAT TGAAGAAAAT 
ATTACCGTTG TGCCGCGCAT GTTGGGTTGG GACAAAGCAC GCTGCAAGCA ACGCGCCGAA 
GAGTTGATGG ACATGGTGGC GCTGGATGCC AGAAAATTTC TGCATCGCTA TCCAAAGGAG 
ATGTCCGGGG GACAGCAGCA GCGCATTGGC GTGATCCGCG CTCTGGCCGC CGATCCGCCG 
GTACTGCTGA TGGATGAGCC CTTCGGCGCG GTGGACCCCA TTAACCGCGA AGTGATCCAG 
AACCAGTTTC TGGATATGCA GCGTAAGCTA AAAAAGACTG TGATGCTGGT CAGCCATGAT 
ATCGACGAAG CGCTAAAACT CGGCGACCGT ATCGCCGTGT TCCGTCAGGG GCGAATTGTA 
CAGTGCGCCA GTCCTGATGA ACTGCTGGCC AAACCGGCTA ACGAGTTTGT CGGGTCGTTT 
GTCGGTCAGG ACAGAACGTT AAAGCGTTTG CTGCTGGTCT CCGCAGGCGA TGTGACCGAC 
CAACAGCCAA CCATTACCGC GCGGCCTTCC ACGCCGTTAA GCGAGGCGTT CGGCATTATG 
GATGATCACG ATATTCGCGC CATTACCGTC ATTGACAACG ACGGTAAGCC ACTGGGATTT 
GTGAAGCGCC GGGAGGCGCG GAACGCCAGC GGAATCTGCG CCGATATCAC CCATCCTTTC 
CGTATTACGG GCAAAGCGGA AGATAATCTG CGTATTGTGC TGTCCAGATT GTACGAAAGT 
AATACCAGCT GGATGCCGAT CGTTGATGAA GACGGGCGCT ATAACGGTGA AATCTCTCAG 
GATTACATCG CCGACTATCT CAGCTCAGGC CGCACGCGTC GGGCGCTAAA TATTCACGAA 
AACAGCTAA
 
Protein sequence
MIKLENLTKQ FVQKKGQPLK AVDNVNLNVP EGEMCVLLGP SGCGKTTTLK MINRLIAPSS 
GNILINGENT NDMDTVTLRR NIGYVIQQIG LFPNMTIEEN ITVVPRMLGW DKARCKQRAE 
ELMDMVALDA RKFLHRYPKE MSGGQQQRIG VIRALAADPP VLLMDEPFGA VDPINREVIQ 
NQFLDMQRKL KKTVMLVSHD IDEALKLGDR IAVFRQGRIV QCASPDELLA KPANEFVGSF 
VGQDRTLKRL LLVSAGDVTD QQPTITARPS TPLSEAFGIM DDHDIRAITV IDNDGKPLGF 
VKRREARNAS GICADITHPF RITGKAEDNL RIVLSRLYES NTSWMPIVDE DGRYNGEISQ 
DYIADYLSSG RTRRALNIHE NS