Gene SeAg_B1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1680 
Symbol 
ID6794810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp1645070 
End bp1645717 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content55% 
IMG OID642775915 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002146551 
Protein GI197250961 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0615748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGA TACATTATAT GCTGGATAAC GCAGGCTATC TCGCCAGCCT TACCTTTCAG 
CATCTCTGGC TGGTCGCGCT GGCCGTCGGT CTGGCGATTA TCATCGGTGT ACCGTTAGGC
GTTTTGATTG TACGCCACAA ATGGCTGGCA ACGCCGGTAT TGGGCGCCGC CACGCTACTT
CTTACCATTC CGTCTATCGC GCTGTTTGGA TTAATGATCC CGCTCTTTTC GCTGATCGGA
CATGGTATTG GCGTTCTGCC CGCCGTGACG GCCGTTTTTC TCTACTCTTT ACTGCCGATT
GTCCGTAATA CCCATACTGC GCTTGATAGT TTGCCGCCCG GTCTGCGTGA AGCGGGACGC
GGCATCGGTA TGACTTTCTG GCAACGGCTG CGCTGGGTCG AAATCCCAAT GGCCCTACCG
GTTATTTTCG GGGGTATCCG CACCGCGGTA GTGATGAATA TCGGCGTAAT GGCGATTGCC
GCGGTGATCG GCGCCGGCGG TCTGGGACTG CTACTGTTAA ACGGCATTAG CAGCAGCGAT
ATTCGCATGT TAATTGCCGG CGCGCTGATG ATCTGTCTAC TGGCGATTGT GCTTGACTGG
CTGTTGCATC GTCTGCAAGT CGTACTGACA CCTAAGGGGA TACGATAA
 
Protein sequence
MDTIHYMLDN AGYLASLTFQ HLWLVALAVG LAIIIGVPLG VLIVRHKWLA TPVLGAATLL 
LTIPSIALFG LMIPLFSLIG HGIGVLPAVT AVFLYSLLPI VRNTHTALDS LPPGLREAGR
GIGMTFWQRL RWVEIPMALP VIFGGIRTAV VMNIGVMAIA AVIGAGGLGL LLLNGISSSD
IRMLIAGALM ICLLAIVLDW LLHRLQVVLT PKGIR