Gene SeAg_B1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1679 
Symbol 
ID6793334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1644158 
End bp1645060 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content52% 
IMG OID642775914 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002146550 
Protein GI197247865 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.165164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTCA AAAAACACCT GTTAGAATGG CTTGCCGCAA CGCTGTTGTT CAGTAGCCAG 
ACGCAGGCCG CGCCGCTGGT TCTCGCTACC AAAAGCTTTA CCGAGCAGCA TATTCTTTCC 
GCTATGACCG TTCAGTATTT GCAGAAAAAA GGCTTTCAGG TTCAGCCGCA AACCAATATC 
GCCGCGGTGA TTTCACGTAA TGCGATGGTG AATAAACAAA TTGATATTAC CTGGGAATAC 
ACCGGTACAT CGCTGATTAT TTTCAACCGT ATCGATAAGC GCATGAGTCC ACAGGAAACC 
TACGACACGG TAAAACGCCT GGATGCGAAG CTGGGCCTGG TATGGCTCAA ACCGGCTGAC 
ATGAACAATA CTTACGCGTT CGCGATGCAG CGCAAACGCG CCGAGTCGGA AAATATCACC 
ACCATCTCGC AAATGGTGGC AAAAATCGAA CAGGTCCGGC AGAACGATCC TGACCACAAC 
TGGATGCTCG GCCTCGATCT GGAATTTGCC GGGCGCAGCG ACGGAATGAA GCCCCTTCAG 
CAAGCCTACC AGATGCAGCT TGATCGCCCG CAAATACGAC AGATGGACCC AGGGCTGGTC 
TATAACGCCG TTCGGGATGG GCTGGTTGAC GCCGGGCTGG TCTATACCAC CGACGGACGG 
GTGAAAGGGT TTGATCTGAA AGTGCTGGAA GATGATAAAG GCTTCTTTCC AAGTTACGCT 
GTCACGCCCG TGGTGCGTAA AGAGGTGCTG GAAGCCAATC CTGGCCTTGA TGACGCCTTA 
AACACCCTTT CCGGCCTGCT CAATAACGAT GTGATATCGA CCCTAAACGC TCAGGTCGAT 
ATCGAGCATC GCACGCCGCA ACAGGTAGCC CATCAATTTT TGCAGGACAA AGGTCTGCTG 
TAA
 
Protein sequence
MRFKKHLLEW LAATLLFSSQ TQAAPLVLAT KSFTEQHILS AMTVQYLQKK GFQVQPQTNI 
AAVISRNAMV NKQIDITWEY TGTSLIIFNR IDKRMSPQET YDTVKRLDAK LGLVWLKPAD 
MNNTYAFAMQ RKRAESENIT TISQMVAKIE QVRQNDPDHN WMLGLDLEFA GRSDGMKPLQ 
QAYQMQLDRP QIRQMDPGLV YNAVRDGLVD AGLVYTTDGR VKGFDLKVLE DDKGFFPSYA 
VTPVVRKEVL EANPGLDDAL NTLSGLLNND VISTLNAQVD IEHRTPQQVA HQFLQDKGLL