Gene SeAg_B1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1589 
Symbol 
ID6796639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp1555593 
End bp1556594 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content49% 
IMG OID642775828 
Productouter membrane porin protein LC 
Protein accessionYP_002146464 
Protein GI197247553 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.810656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTA CCAAAATCAT TAGGGGATTC ATCAGCGCTC AGCATTATTT CTCTGATGAT 
AACGGAAGTG ATGGTGACAA AACTTACGCG CGTCTGGGCT TTAAAGGCGA AACGCAGATC 
AATGACCAAC TGGTTGGTTT TGGCCAGTGG GAATATGAAT TCAAAGGCAA CCGTACTGAA 
TCTGAAGGTT CCGACAAAGA CAAAACCCGT CTGGCATTCG CTGGTCTGAA ATTCGCTGAA 
TACGGTTCTT TCGACTACGG TCGTAACTAC GGCGTTGCTT ACGACATCGG CGCATGGACC 
GACGTTCTGC CAGAGTTCGG TGGCGATACC TGGACCCAGA CTGACGTATT CATGACCCAG 
CGTGCTACCG GCGTTGCCAC CTACCGTAAC ACCGATTTCT TCGGTCTGGT TGAAGGTCTG 
AACTTTGCCG CGCAGTATCA GGGCAAAAAC GATCGTGACA ATGAAGTAGA AGCAAACGGC 
GACGGTTTCG GTCTGTCCGC AACGTATGAG TACGAAGGTT TTGGCGTGGG TGCGGCCTAT 
GCGAAGTCTG ACCGTACTGA CCGTCAGGTG CGCAACGGCA CCAATGGCCT GTATGCTTCT 
GGCCAGAATG CGGAAGTGTG GGCTGCTGGT CTGAAATATG ATGCGAACAA TATCTATCTG 
GCGACCACCT ACTCCGAAAC GCTGAATATG ACCACATTCG GTAAAATCGA CGGTATTGCT 
AACAAAACTC AGAACTTTGA AGCTGTTGCT CAGTACCAGT TCGACTTCGG TCTGCGTCCG 
TCCATTGCTT ACCTGAAATC CAAAGGTAAA GATCTGGGTG CTTACGGCGA CCAGGATCTG 
GTTGAGTACA TCGATGTCGG TGCTACCTAC TACTTCAACA AAAACATGTC CACCTTCGTT 
GATTACAAAA TCAACCTGCT GGATGACACC AACTTCACTA AAAATGTTGC GCAGATCAGC 
ACTGACAACA TCGTTGCTGT TGGTCTGAAC TACCAGTTCT AA
 
Protein sequence
MIFTKIIRGF ISAQHYFSDD NGSDGDKTYA RLGFKGETQI NDQLVGFGQW EYEFKGNRTE 
SEGSDKDKTR LAFAGLKFAE YGSFDYGRNY GVAYDIGAWT DVLPEFGGDT WTQTDVFMTQ 
RATGVATYRN TDFFGLVEGL NFAAQYQGKN DRDNEVEANG DGFGLSATYE YEGFGVGAAY 
AKSDRTDRQV RNGTNGLYAS GQNAEVWAAG LKYDANNIYL ATTYSETLNM TTFGKIDGIA 
NKTQNFEAVA QYQFDFGLRP SIAYLKSKGK DLGAYGDQDL VEYIDVGATY YFNKNMSTFV 
DYKINLLDDT NFTKNVAQIS TDNIVAVGLN YQF