Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1515 |
Symbol | hrpA |
ID | 6795496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1471898 |
End bp | 1475818 |
Gene Length | 3921 bp |
Protein Length | 1306 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642775755 |
Product | ATP-dependent RNA helicase HrpA |
Protein accession | YP_002146391 |
Protein GI | 197250749 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCCA AGAGCTTTAT GACTGAACAA TCTATGTTGA CGCTTCAGGT GTTACAGCAG CGGCTGGATG CACTGATGCT GCGCGACAAA CAGCGCTTTG CGCGCCGCCT GCATGGCGTA AAGAAAGTAA AAAATCCTGA TGCGCAACAG GCCATTTTCC AGACGATGGC GAAAGAAATT GAACAGGCTG CGACCCAGGT CGCTCTCCGC GAAGCGGCGC GCCCCTCAAT CACTTATCCG CAAAATCTGC CTGTTAGCCA GAAGAAACAG GACATTCTGG AAGCGGTCCG CGATCATCAG GTGGTGATCG TGGCAGGGGA AACCGGTTCC GGTAAAACCA CCCAGTTGCC GAAAATTTGT ATGGAACTGG GACGCGGAAT TAAAGGACTT ATTGGACATA CTCAACCGCG TCGTCTGGCG GCGCGCACCG TCGCTAACCG CATTGCCGAA GAGTTGCAAA CGGAGCCTGG CGGCTGCATC GGCTATAAAG TTCGTTTCAG CGATCATGTC AGTAGCAACA CCATGGTCAA ACTGATGACG GACGGTATCC TGCTGGCGGA AATCCAGCAG GACAGGCTAT TGATGCAGTA TGACACCATC ATTATTGATG AAGCGCATGA ACGCAGCCTG AATATTGACT TCTTGCTCGG CTATCTGAAA GAGCTTCTGC CGCGTCGCCC CGATCTGAAA GTGATTATTA CCTCTGCGAC CATCGACCCG GAACGCTTCT CGCGCCACTT TAATAACGCG CCGATTATCG AAGTCTCTGG CCGAACGTAT CCCGTAGAAG TTCGTTATCG CCCCATCGTG GAAGAGGCTG ACGACACTGA ACGCGATCAG CTACAGGCAA TTTTCGACGC TGTTGATGAA CTGGGGCGTG AAAGTCCCGG CGATATCCTG ATTTTTATGA GCGGAGAGCG GGAAATCCGC GATACCGCCG ACGCCCTGAA CAAGCTGAAC TTACGGCATA CCGAAGTGTT GCCGCTGTAT GCACGCTTGT CGAACAGCGA ACAGAACCGC GTTTTCCAGT CGCACAGCGG ACGCCGTATC GTGCTGGCAA CTAACGTGGC GGAAACGTCG CTGACGGTGC CGGGTATCAA GTATGTGATC GATCCTGGCA CTGCGCGCAT CAGCCGCTAC AGCTACCGCA CTAAAGTGCA GCGCCTGCCG ATTGAACCGA TCTCACAGGC TTCCGCCAAC CAGCGTAAAG GGCGTTGCGG GCGCGTATCG GAAGGGATTT GCATTCGTCT GTATTCGGAA GATGACTTTT TGTCACGTCC GGAATTTACC GACCCGGAAA TTCTACGTAC CAACCTGGCG TCGGTTATTT TGCAGATGAC CGCCTTGGGG CTGGGTGACA TCGCCGCCTT CCCGTTTGTC GAAGCGCCGG ATAAGCGCAA TATTCAGGAT GGCGTACGTT TGTTGGAAGA GCTGGGGGCG ATTACCGCCG ACGAACAGCA AACGGCATAT AAGCTGACGC CGCTAGGCCG ACAATTATCT CAGCTGCCGG TCGACCCGCG CCTGGCGCGT ATGGTTCTGG AAGCGCAAAA ACATGGCTGT GTGCGCGAAG CGATGATCAT TACTTCCGCA CTCTCTATTC AGGATCCGCG CGAGCGCCCA GTGGATAAGC AGCAGGCTTC CGATGAGAAA CACCGGCGTT TCCATGATAA GGAATCCGAT TTTCTGGCGT TTGTTAACCT GTGGAATTAC CTCGGCGAGC AACAAAAGGC CCTGTCGTCG AATCAATTCC GCCGTCTGTG TCGCACCGAC TATCTGAACT ATTTACGCGT GCGTGAGTGG CAGGATATCT ATACCCAACT GCGTCAGGTG GTAAAAGAAC TGGGGATTCC GGTAAACAGC GAACCCGCAG AATACCGGGA AATTCACGTT GCGTTGTTAA CGGGGCTGTT GTCGCATATC GGGATGAAAG ATGCCGATAA ACAAGAGTAC ACCGGCGCGC GTAACGCCCG ATTCTCTATT TTCCCCGGTT CCGGTTTATT CAAAAAACCG CCGAAATGGA CAATGGTCGC AGAACTGGTG GAGACCAGCC GCCTGTGGGG GCGCATCGCT GCCCGCATTG AGCCAGAATG GGTGGAACCG GTAGCCCAGC ACCTGATTAA ACGTTCATAT AGCGAACCGC ACTGGGAGCG GGCGCAAGGC GCGGTGATGG CGACGGAAAA GGTTACTGTC TACGGTCTGC CGATTGTCGC CGCGCGCAAG GTGAATTATA GCCAGATTGA CCCGGCGTTG TGTCGCGAGT TGTTCATCCG CCATGCGCTG GTGGAGGGGG ACTGGCAAAC CCGTCACGCC TTCTTCCGTG AGAATCTAAA ATTGCGTGCG GAAGTCGAGG AACTTGAGCA CAAATCTCGC CGCCGCGATA TCCTGGTGGA TGACGATACC CTGTTTGAGT TTTATGACCA GCGTATTAGC CATGACGTTA TTTCCGCCCG CCACTTTGAT AGTTGGTGGA AAAAAATCAG CCGCGAGACG CCGGATCTAC TCAACTTTGA AAAAAGTATG CTGATTAAAG AAGGCGCGGA AAAAATCAGC AAACTGGATT ACCCGAATTT CTGGCACCAG GGCAATCTCA AGCTGCGTTT GAGCTATCAG TTTGAACCGG GCGCGGATGC TGACGGCGTG ACCGTCCATA TTCCGTTGCC GCTACTTAAC CAGGTTGACG AGAGCGGTTT TGAATGGCAG ATCCCAGGGC TGCGCCGTGA ATTAGTGATT GCGCTGATTA AATCGTTGCC AAAACCGGTA CGTCGCAACT TTGTTCCGGC GCCAAACTAT GCTGAAGCGT TTTTAGGTCA CGTAACGCCG CTGGAGCTGC CGCTGCTGGA CGCTCTGGAG CGTGAACTGC GCCGGATGAC CGGCGTCACG GTCGACCGGG AAGACTGGCA TTGGGATCAG GTGCCCGAGC ATCTGAAAAT CACGTTTCGC GTGGTGAATG ACAAAAACAA GAAACTGCAG GAAGGGCGTT CGCTCGCCGA GCTTAAAAAT GCGCTGAAAG GCAAAGTGCA GGAGACGCTC TCGGCGGTGG CGGATGACGG CATTGAGCAG AGCGGGCTGC ATATCTGGAG TTTCGGCGAG CTGCCGGAAA GCTACGAACA GAAACGCGGT AATTATAAAG TGAAGGCGTG GCCGGCGTTA GTGGATGAAC GTGACAGCGT CGCTATCAAA TTGTTTGATA ATCCGCTGGA ACAACAACAG GCGATGTGGT GCGGTTTACG CCGTCTGCTG TTGCTCAATA TTCCTTCACC GATTAAGTAT CTGCATGAGA AATTGCCGAA TAAAGCCAAG CTGGGGCTGT ACTTTAACCC GTACGGCAAA GTACTGGAGT TGATTGATGA CTGTATTGCC TGCGGGGTAG ATAAACTGAT AGATGCCAAC GGCGGGCCGG TGTGGAGCGA AGCAGGTTTC ACCGCGCTGC ACGAAAAGGT ACGCGCCGAG CTGAATGATA CTGTGGTGGA TATCGCGAAG CAGGTTGAGC GCATCCTGAC GACCGTATTC AATATCAATA AGCGTCTGAA AGGGCGGGTG GATATGAGCA TGGCGTTGGG GCTTTCCGAT ATCAAGGCGC AGATGAGCGG TCTGGTATAC CGTGGTTTTG TGACTGGCAA CGGCTTTAAA CGTCTCGGCG ATACGCTGCG TTATCTGCAG GCAATTGAAA AGCGGCTGGA GAAACTGGCT GTCGATCCGC ACCGCGATCG GGCGCAAATG CTGAAAGTCG AAAGCGTCCA GCAGGCGTGG CAACAATGGA TAAATAAATT GCCTCCAGCG CGTCGCGAAG ATGATGATGT TAAAGAGATC CGTTGGATGA TTGAAGAACT GCGTGTCAGT TATTTCGCCC AACAGCTCGG TACGCCTTAT CCTATTTCCG ATAAGCGTAT TTTACAGGCC ATGGATCAGA TTACGGTCTA A
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Protein sequence | MLPKSFMTEQ SMLTLQVLQQ RLDALMLRDK QRFARRLHGV KKVKNPDAQQ AIFQTMAKEI EQAATQVALR EAARPSITYP QNLPVSQKKQ DILEAVRDHQ VVIVAGETGS GKTTQLPKIC MELGRGIKGL IGHTQPRRLA ARTVANRIAE ELQTEPGGCI GYKVRFSDHV SSNTMVKLMT DGILLAEIQQ DRLLMQYDTI IIDEAHERSL NIDFLLGYLK ELLPRRPDLK VIITSATIDP ERFSRHFNNA PIIEVSGRTY PVEVRYRPIV EEADDTERDQ LQAIFDAVDE LGRESPGDIL IFMSGEREIR DTADALNKLN LRHTEVLPLY ARLSNSEQNR VFQSHSGRRI VLATNVAETS LTVPGIKYVI DPGTARISRY SYRTKVQRLP IEPISQASAN QRKGRCGRVS EGICIRLYSE DDFLSRPEFT DPEILRTNLA SVILQMTALG LGDIAAFPFV EAPDKRNIQD GVRLLEELGA ITADEQQTAY KLTPLGRQLS QLPVDPRLAR MVLEAQKHGC VREAMIITSA LSIQDPRERP VDKQQASDEK HRRFHDKESD FLAFVNLWNY LGEQQKALSS NQFRRLCRTD YLNYLRVREW QDIYTQLRQV VKELGIPVNS EPAEYREIHV ALLTGLLSHI GMKDADKQEY TGARNARFSI FPGSGLFKKP PKWTMVAELV ETSRLWGRIA ARIEPEWVEP VAQHLIKRSY SEPHWERAQG AVMATEKVTV YGLPIVAARK VNYSQIDPAL CRELFIRHAL VEGDWQTRHA FFRENLKLRA EVEELEHKSR RRDILVDDDT LFEFYDQRIS HDVISARHFD SWWKKISRET PDLLNFEKSM LIKEGAEKIS KLDYPNFWHQ GNLKLRLSYQ FEPGADADGV TVHIPLPLLN QVDESGFEWQ IPGLRRELVI ALIKSLPKPV RRNFVPAPNY AEAFLGHVTP LELPLLDALE RELRRMTGVT VDREDWHWDQ VPEHLKITFR VVNDKNKKLQ EGRSLAELKN ALKGKVQETL SAVADDGIEQ SGLHIWSFGE LPESYEQKRG NYKVKAWPAL VDERDSVAIK LFDNPLEQQQ AMWCGLRRLL LLNIPSPIKY LHEKLPNKAK LGLYFNPYGK VLELIDDCIA CGVDKLIDAN GGPVWSEAGF TALHEKVRAE LNDTVVDIAK QVERILTTVF NINKRLKGRV DMSMALGLSD IKAQMSGLVY RGFVTGNGFK RLGDTLRYLQ AIEKRLEKLA VDPHRDRAQM LKVESVQQAW QQWINKLPPA RREDDDVKEI RWMIEELRVS YFAQQLGTPY PISDKRILQA MDQITV
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