| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1447 |
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| Symbol | |
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| ID | 6795870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 1404485 |
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| End bp | 1406476 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642775691 |
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| Product | RNase II stability modulator |
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| Protein accession | YP_002146327 |
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| Protein GI | 197248127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00630627 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACGCA TGATGAAACA GATTCAGGAA CAAACGGCGC TAAATCCCCT TCACTCTCAC
TGGCGTCTGG CTGATGACCG CAACGTGCTG TATCTCTCCC CGACAGGTGA AACGGATGCA
GAAAAAACGG TTGAGCTATC GCCGGAACAA GCCGGGCGTA TCCGGGAAAT AACGGCGATT
ACGTCCAGTC TGCTGATAAC GTTGTTGATA GAAAAACAGG TTACCGCTGT GCACCTGGTA
GGCCGTAAGA TTAATAACCG TGAATGGGCT GGAAGCCTGG CAACCTGGCC TGATACGCCT
GCCGTCTCGC CAACGCAGGC GCAGGAGCTC TCTTTTGCCG AGCAAATCGT ATCAGAAGCC
AACTCAGTCA TTGCGATACT GGATAGTCGG GGAAAAATCT GTCGATTTAA TCGGTTATGC
GAAGAGTACA CGGGCTTAAA AGAGCAAGAT GTAATTGGTC AAAGCGTCTT TAAATTATTT
ATGAGCCGCC GGGAGGCGGT TGCCTCCCGA CACTACATTG AGAATTTTTT TCGCAATGGG
AATGCCTATG AAATCGAACG CTGGATAAAG ACCCGTAAAG GCCAACGCTT GTTCTTATTT
CGTAATAAAT TCATCCATAA CGGTAGCGGA AAAAACGAAA TTTTCCTGAT CTGCGCAGGC
ACGGATATCA CCGAAGAAAG GCGGGCTCAG GAGCGTTTAC GCATACTGGC GAATACAGAC
ACCGTCACCG GCCTGCCCAA TCGCAATGCT ATCCATGAAT TTATTAATCA TGCTATTGCC
TCGGCTGGCG AGTCGCAGGT GGGTATCGTT TATCTCGATC TGGATAACTT CAAGAAAATT
AATGACACCT ATGGGCATAT GTTTGGCGAT CAGCTCTTAC AGGCCGTTTC GCTGGCGCTG
TTGAGTTGTC TGGAGGAAGA TCAATTGCTG GCCAGACTGG GGGGAGATGA ATTCATTATC
CTCGCTGCCC ATACGTCTCA GGCCGCGCTG GAAGCAGTAG CCTCACGAAT CCTTACCCGT
CTGCGGCAAC CGTTTCGTAT TGGACTCATT GAAGTTTACA CGGGATGCGC CATTGGCATT
TCGTTGGCCC CCCGGCACGG ACAGGACAGC GAAAGTCTCA TTCGCACTGC CGATACCGCA
ATGTATAACG CCAAAGAAGG CGGCCGCGGT CAGTTCTGCG TTTTTTCGCC TGAAATGAAT
CAGCGCGTAT TTGACTATCA CTGGCTGGAT ACAAACCTGC GAAAAGCGCT GGAAAACGAC
CAGTTACTTA TTCACTATCA GCCCAAAATT ACCTGGCGCG GCGAAGTACG TAGCCTGGAA
GCGCTGGTAC GCTGGCAATC GCCGGAACGC GGATTAATTC CGCCGCTGGA GTTCATCTCA
TACGCCGAAG AGTCAGGACT CATCGTCCCG CTGGGCCGCT GGGTGATTCT GGATGTAGTT
CGCCAGATTG CGAAATGGCG CGATAAGGGG ATTAACTTGC GCGTAGCCGT TAACTTTTCG
GCGCGACAAC TGGCCGACCA GACGCTTTTT ACTGCGCTTA AACAGGCTTT GTACGATCTG
AATTTTGAGT ATTGCCCGAT CGATGTCGAG CTAACGGAAA GCTGCCTGAT CGAAAACGAC
ACGCTGGCGC TATCGGTTAT CCAGCAATTT AGTCAGCTCG GCGCTCAGAT TCATCTGGAT
GATTTTGGCA CCGGGTATTC TTCGCTTTCC CAACTCGCAC GGTTCCCTAT TGATGCCGTT
AAACTGGATC AGGCTTTCGT CAGAGATATC CATAAGCAAC CGCTGTCGCA ATCTCTGGTT
CGGGCGATTG TCGCGGTGGC TCAGGCGCTA AATTTACAAG TGATTGCCGA AGGCGTAGAA
AATGCTAAAG AAGATGCCTT CCTGACAAAA AACGGTGTCA ATGAACGACA GGGCTTTTTA
TTCGCTAAAC CTATGCCCGC CGTTTCTTTT GAACGCTGGT ACAAACGTTA TCAGACGAAA
AAAATGCGTT AA
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| Protein sequence | MVRMMKQIQE QTALNPLHSH WRLADDRNVL YLSPTGETDA EKTVELSPEQ AGRIREITAI
TSSLLITLLI EKQVTAVHLV GRKINNREWA GSLATWPDTP AVSPTQAQEL SFAEQIVSEA
NSVIAILDSR GKICRFNRLC EEYTGLKEQD VIGQSVFKLF MSRREAVASR HYIENFFRNG
NAYEIERWIK TRKGQRLFLF RNKFIHNGSG KNEIFLICAG TDITEERRAQ ERLRILANTD
TVTGLPNRNA IHEFINHAIA SAGESQVGIV YLDLDNFKKI NDTYGHMFGD QLLQAVSLAL
LSCLEEDQLL ARLGGDEFII LAAHTSQAAL EAVASRILTR LRQPFRIGLI EVYTGCAIGI
SLAPRHGQDS ESLIRTADTA MYNAKEGGRG QFCVFSPEMN QRVFDYHWLD TNLRKALEND
QLLIHYQPKI TWRGEVRSLE ALVRWQSPER GLIPPLEFIS YAEESGLIVP LGRWVILDVV
RQIAKWRDKG INLRVAVNFS ARQLADQTLF TALKQALYDL NFEYCPIDVE LTESCLIEND
TLALSVIQQF SQLGAQIHLD DFGTGYSSLS QLARFPIDAV KLDQAFVRDI HKQPLSQSLV
RAIVAVAQAL NLQVIAEGVE NAKEDAFLTK NGVNERQGFL FAKPMPAVSF ERWYKRYQTK
KMR
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