| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1427 |
|---|
| Symbol | rluB |
|---|
| ID | 6793996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 1386330 |
|---|
| End bp | 1387205 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642775671 |
|---|
| Product | 23S rRNA pseudouridylate synthase B |
|---|
| Protein accession | YP_002146307 |
|---|
| Protein GI | 197249960 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.535105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA AGTTACAAAA AGTGCTGGCG CGCGCTGGCC ACGGCTCTCG CCGTGAAATC
GAATCCATTA TTGAAGCGGG ACGTGTCAGC GTTGACGGTA AAATCGCCAC GCTTGGCGAT
CGTGTTGAAG TCACTCCCGG TTTGAAAATC CGTATCGACG GTCACCTGAT TTCGGTGAAA
GAGTCGGCGG AACAAATTTG CCGCGTTCTG GCCTATTACA AACCAGAAGG TGAACTGTGT
ACCCGCAATG ACCCTGAAGG GCGACCAACC GTTTTTGATC GCTTACCGAA ACTGCGCGGC
GCGCGGTGGA TTGCGGTAGG ACGTCTGGAT GTCAACACCT GCGGGCTATT GTTATTTACC
ACCGACGGTG AACTGGCGAA CCGCCTGATG CACCCTAGTC GTGAAGTTGA ACGTGAATAT
GCCGTGCGCG TGTTCGGTCA GGTGGATGAA TCGAAACTGC GTGATTTAAG CCGTGGCGTA
CAGTTGGAAG ATGGTCCGGC GGCATTTAAG ACCATTAAAT TCAGCGGCGG CGAAGGCATT
AACCAGTGGT ATAACGTGAC GCTGACGGAA GGGCGCAACC GCGAAGTTCG CCGACTGTGG
GAAGCGGTAG GCGTTCAGGT CAGCCGTCTG ATCCGCGTTC GTTACGGCGA TATCCCGCTG
CCGAAAGGCC TGCCGCGCGG CGGCTGGACT GAGCTCGACC TCGCGCAAAC GAACTATCTG
CGTGGTCTGG TAGAGCTCCC GCCGGAAACC TCGTCGAAGG TTGCCGTCGA AAAAGACCGT
CGTCGTATGA AAGCGAACCA GATCCGTCGG GCGGTAAAAC GCCACAGCCA GATAGCTGGC
GGACGCCGCT CCGGTGGGCG TAATAACAAC GGGTAA
|
|---|
| Protein sequence | MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIATLGD RVEVTPGLKI RIDGHLISVK
ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT
TDGELANRLM HPSREVEREY AVRVFGQVDE SKLRDLSRGV QLEDGPAAFK TIKFSGGEGI
NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL
RGLVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQIAG GRRSGGRNNN G
|
|---|
| |