| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1419 |
|---|
| Symbol | trpA |
|---|
| ID | 6794057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 1377931 |
|---|
| End bp | 1378737 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642775664 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_002146300 |
|---|
| Protein GI | 197250321 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCT ACGAAAATTT ATTTGCACAG CTCAACGATC GCCGGGAAGG CGCTTTTGTC
CCCTTCGTGA CCCTGGGCGA CCCTGGCATT GAACAGTCAC TGAAAATTAT CGACACACTG
ATTGACGCTG GCGCCGACGC TCTGGAACTG GGTGTTCCCT TCTCCGATCC GCTGGCCGAT
GGCCCCACCA TCCAGAATGC GAACTTACGC GCCTTCGCCG CTGGCGTCAC GCCGGCTCAG
TGTTTTGAAA TGCTGGCGCT GATTCGTGAA AAACACCCGA CCATTCCGAT TGGCCTGCTA
ATGTACGCGA ATCTGGTGTT CAATAACGGC ATAGATGCGT TCTATGCCCG CTGTGAACAG
GTTGGCGTAG ATTCCGTGCT GGTCGCAGAT GTCCCGGTTG AAGAATCGGC CCCCTTCCGC
CAGGCGGCGT TACGGCATAA TATCGCGCCG ATCTTCATCT GCCCGCCAAA TGCGGATGAC
GATCTTCTGC GCCAGGTCGC ATCTTACGGC CGCGGTTACA CCTACCTGCT TTCGCGTTCG
GGCGTCACCG GCGCGGAAAA CCGTGGCGCA TTGCCGTTGC ATCATCTCAT TGAGAAGCTT
AAAGAGTACC ATGCCGCGCC TGCGTTACAG GGCTTCGGTA TCTCCTCGCC GGAACAGGTG
TCTGCGGCCG TGCGTGCCGG GGCGGCTGGC GCTATCTCCG GCTCAGCCAT TGTCAAGATT
ATCGAGAAAA ACCTCGCGTC TCCCGAACAG ATGTTGGCGG AGCTCAGGTC CTTTGTCTCA
GCCATGAAAG CCGCCAGCCG CGCATAA
|
|---|
| Protein sequence | MERYENLFAQ LNDRREGAFV PFVTLGDPGI EQSLKIIDTL IDAGADALEL GVPFSDPLAD
GPTIQNANLR AFAAGVTPAQ CFEMLALIRE KHPTIPIGLL MYANLVFNNG IDAFYARCEQ
VGVDSVLVAD VPVEESAPFR QAALRHNIAP IFICPPNADD DLLRQVASYG RGYTYLLSRS
GVTGAENRGA LPLHHLIEKL KEYHAAPALQ GFGISSPEQV SAAVRAGAAG AISGSAIVKI
IEKNLASPEQ MLAELRSFVS AMKAASRA
|
|---|
| |