Gene SeAg_B1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1403 
SymboloppF 
ID6795544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1366383 
End bp1367387 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content54% 
IMG OID642775649 
Productoligopeptide ABC transporter, ATP-binding protein OppF 
Protein accessionYP_002146285 
Protein GI197249962 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTG TGATTGAACA ACGTAAAGTT CTCCTCGAAA TCGCCGATCT GAAAGTACAT 
TTTGATATCA AAGAAGGAAA GCAGTGGTTC TGGCAACCGC CGAAAACCCT GAAAGCGGTG 
GACGGCGTTA CGCTACGCCT GTATGAAGGC GAAACGCTGG GCGTGGTGGG CGAATCCGGC 
TGCGGCAAGT CGACGTTTGC GCGCGCCATT ATTGGTCTGG TGAAGGCGAC AGACGGTAAA 
GTCGCCTGGC TGGGAAAAGA TCTGTTGGGC ATGAAAGCGG ATGAGTGGCG CGAGGTGCGC 
AGCGATATCC AGATGATTTT CCAGGACCCG CTGGCGTCAC TCAACCCGCG AATGACGATT 
GGCGAAATTA TCGCTGAACC GCTGCGCACT TATCATCCTA AACTTTCGCG CCAGGACGTG 
CGTGACCGCG TGAAAGCCAT GATGCTGAAA GTGGGGCTGC TGCCGAATCT CATCAACCGT 
TATCCCCATG AATTTTCCGG GGGGCAGTGC CAGCGCATCG GTATCGCCCG GGCGTTGATC 
CTGGAACCTA AGCTTATTAT TTGCGATGAG CCGGTGTCGG CGCTGGACGT TTCTATTCAG 
GCGCAGGTGG TGAATTTGCT CCAGCAGTTA CAGCGAGAGA TGGGGCTGTC GTTGATTTTT 
ATTGCGCACG ACCTGGCGGT CGTAAAGCAC ATATCCGATC GTGTCCTGGT GATGTATCTC 
GGTCATGCAG TAGAATTGGG CACCTATGAT GAGGTGTACC ATAATCCACT GCATCCTTAT 
ACCAAAGCGC TGATGTCGGC GGTACCGATT CCCGATCCCG ATCTGGAGCG AAATAAGAAG 
ATACAATTGC TGGAGGGCGA ATTACCTTCG CCCATTAACC CGCCTTCCGG CTGCGTGTTC 
CGTACACGCT GTCCGATAGC CGGGCCAGAA TGCGCGCAAA CGCGACCGGT GCTGGAAGGG 
AGTTTTCGCC ATGCCGTTTC CTGCCTTAAA GTAGACCCGT TATAA
 
Protein sequence
MNAVIEQRKV LLEIADLKVH FDIKEGKQWF WQPPKTLKAV DGVTLRLYEG ETLGVVGESG 
CGKSTFARAI IGLVKATDGK VAWLGKDLLG MKADEWREVR SDIQMIFQDP LASLNPRMTI 
GEIIAEPLRT YHPKLSRQDV RDRVKAMMLK VGLLPNLINR YPHEFSGGQC QRIGIARALI 
LEPKLIICDE PVSALDVSIQ AQVVNLLQQL QREMGLSLIF IAHDLAVVKH ISDRVLVMYL 
GHAVELGTYD EVYHNPLHPY TKALMSAVPI PDPDLERNKK IQLLEGELPS PINPPSGCVF 
RTRCPIAGPE CAQTRPVLEG SFRHAVSCLK VDPL